RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 HOXC13P31276 330 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 DDIT3P35638 169 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 RAD23BP54727 409 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 ISL1P61371 349 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 PDE1BQ01064 536 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 GTF2H2Q13888 395 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 KRT72Q14CN4 511 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 POSTNQ15063 836 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 ANKRD1Q15327 319 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 KRT24Q2M2I5 525 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 TCTN1Q2MV58 587 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZNF667Q5HYK9 610 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 SYCP2LQ5T4T6 812 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 GTF2H2CQ6P1K8 395 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 C15orf39Q6ZRI6 1047 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 ASB18Q6ZVZ8 466 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 LINGO2Q7L985 606 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 GTSCR1Q86UQ5 136 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 CERS3Q8IU89 383 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 HERC6Q8IVU3 1022 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 LYG1Q8N1E2 194 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 TRAPPC12Q8WVT3 735 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 STAMQ92783 540 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 ST6GAL2Q96JF0 529 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZNF599Q96NL3 588 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 EYA3Q99504 573 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 MTERF1Q99551 399 aaKnown RBP2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 CMKLR1Q99788 373 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 PYGO2Q9BRQ0 406 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 FAM167BQ9BTA0 163 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 UPF2Q9HAU5 1272 aaKnown RBP2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 NOD2Q9HC29 1040 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 MAGEE1Q9HCI5 957 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 BPIFA1Q9NP55 256 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 MAP3K20Q9NYL2 800 aaKnown RBP2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZNF624Q9P2J8 865 aaPredicted RBP2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 FEM1BQ9UK73 627 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 FBXO9Q9UK97 447 aaPredicted RBP2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 DLGAP4Q9Y2H0 992 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 LOXL2Q9Y4K0 774 aa2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 GREB1LQ9C091 1923 aaPredicted RBP2.26□□□□□ -2.05
RNU4-42P-201ENST00000364738 VWA3AA6NCI4 1184 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 B9A039 149 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 CRLF1O75462 422 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 CNPP09543 421 aaKnown RBP2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 DDX5P17844 614 aaKnown RBP2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 DEKP35659 375 aaKnown RBP2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 CHKAP35790 457 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 EEF1A1P68104 462 aaKnown RBP2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 GAGE5Q13069 117 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 GAGE6Q13070 117 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZNF234Q14588 700 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 TAF11Q15544 211 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 SLC45A4Q5BKX6 768 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 ANKRD45Q5TZF3 282 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 EEF1A1P5Q5VTE0 462 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 SLC27A1Q6PCB7 646 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 CCDC174Q6PII3 467 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 FBXO46Q6PJ61 603 aaPredicted RBP2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 ATF7IPQ6VMQ6 1270 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 STXBP4Q6ZWJ1 553 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 ADGRG6Q86SQ4 1221 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 TADA2BQ86TJ2 420 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 MOGAT3Q86VF5 341 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 C2CD5Q86YS7 1000 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZCCHC9Q8N567 271 aaKnown RBP2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 STPG4Q8N801 248 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 SPPL3Q8TCT6 385 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 LRR1Q96L50 414 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 ASCL2Q99929 193 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 DCTN5Q9BTE1 182 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 ZNF700Q9H0M5 742 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 KCNN2Q9H2S1 579 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 GPR108Q9NPR9 543 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 SLC52A3Q9NQ40 469 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 OGFRQ9NZT2 677 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 KIAA1456Q9P272 454 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 NAP1L2Q9ULW6 460 aaPredicted RBP2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 FAM96BQ9Y3D0 163 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 DAAM1Q9Y4D1 1078 aa2.25□□□□□ -2.05
RNU4-42P-201ENST00000364738 IGLV5-45A0A087WSX0 123 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 SMIM1B2RUZ4 78 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 MT-CYBP00156 380 aaPredicted RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 IGHV4-39P01824 125 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 HEXAP06865 529 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 CHRNB4P30926 498 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 MMP14P50281 582 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 METAP2P50579 478 aaKnown RBP eCLIP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 EFNA5P52803 228 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 LMO4P61968 165 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 GNB1P62873 340 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 IRX6P78412 446 aaPredicted RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 GRIK2Q13002 908 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 SGO1Q5FBB7 561 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 TTI2Q6NXR4 508 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 METTL2BQ6P1Q9 378 aaKnown RBP2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 FAM171BQ6P995 826 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 TDRPQ86YL5 185 aa2.24□□□□□ -2.05
RNU4-42P-201ENST00000364738 TMTC1Q8IUR5 882 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms