RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 HDDC3Q8N4P3 179 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 PTGR2Q8N8N7 351 aaPredicted RBP5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 DCAF4L2Q8NA75 395 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 STYXQ8WUJ0 223 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 HERVK_113Q902F9 699 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 LINGO1Q96FE5 620 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 CDKN2AIPNLQ96HQ2 116 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 NSUN3Q9H649 340 aaKnown RBP5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 ACTR8Q9H981 624 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 MID1IP1Q9NPA3 183 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 ELOVL2Q9NXB9 296 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 ARMCX1Q9P291 453 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 TEX264Q9Y6I9 313 aa5.5□□□□□ -1.53
PCDH11X-202ENST00000361655 PRMT5O14744 637 aaPredicted RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 LEFTY1O75610 366 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PRNPP04156 253 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PCCBP05166 539 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 LTA4HP09960 611 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ENO3P13929 434 aaPredicted RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TCN1P20061 433 aaPredicted RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 DDX6P26196 483 aaKnown RBP eCLIP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 MAPK9P45984 424 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 CRY1Q16526 586 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SH2D4BQ5SQS7 431 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 METTL3Q86U44 580 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SERPINA9Q86WD7 417 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ARHGAP12Q8IWW6 846 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 DEFB119Q8N690 84 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 OLIG1Q8TAK6 271 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TRPC4APQ8TEL6 797 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SCAMP4Q969E2 229 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 GRAMD1AQ96CP6 724 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 MRGPRX2Q96LB1 330 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 VN1R3Q9BXE9 311 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 OSBPL6Q9BZF3 934 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ECT2Q9H8V3 914 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TXLNGQ9NUQ3 528 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 COQ6Q9Y2Z9 468 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ARIH1Q9Y4X5 557 aaPredicted RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 NEMP2A6NFY4 417 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TK2O00142 265 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 FFAR3O14843 346 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 GPR42O15529 346 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 MMP20O60882 483 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 NIPSNAP2O75323 286 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 DLDP09622 509 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PRSS56P0CW18 603 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PKMP14618 531 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TARSP26639 723 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ECHS1P30084 290 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 CLCN5P51795 746 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 IRF9Q00978 393 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SLC20A2Q08357 652 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 GRSF1Q12849 480 aaKnown RBP eCLIP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 USP4Q13107 963 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 EMC10Q5UCC4 262 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ADGRD1Q6QNK2 874 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 Q6ZVL8 140 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TRPM8Q7Z2W7 1104 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TRIM74Q86UV6 250 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SPATS2Q86XZ4 545 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 AHI1Q8N157 1196 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 CHST14Q8NCH0 376 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 FEM1CQ96JP0 617 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 MARK4Q96L34 752 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ZSWIM3Q96MP5 696 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PSKH2Q96QS6 385 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TMEM216Q9P0N5 145 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PSMD13Q9UNM6 376 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TRIM33Q9UPN9 1127 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ZNF711Q9Y462 761 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 DNAH12Q6ZR08 3092 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 CABIN1Q9Y6J0 2220 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SCN10AQ9Y5Y9 1956 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 IFRD1O00458 451 aaPredicted RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ANP32DO95626 131 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 AHSGP02765 367 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PSMC3P17980 439 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SPAM1P38567 509 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 RGRP47804 291 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SLC6A11P48066 632 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PIK3CGP48736 1102 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ITPRIPL2Q3MIP1 535 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 RBM20Q5T481 1227 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 CPNE9Q8IYJ1 553 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 POU5F2Q8N7G0 328 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PIP4K2CQ8TBX8 421 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PPWD1Q96BP3 646 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SLC39A13Q96H72 371 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 FCRL3Q96P31 734 aaPredicted RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TSGA13Q96PP4 275 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PANX3Q96QZ0 392 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 ZBTB18Q99592 522 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TMEM120AQ9BXJ8 343 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 MRPL46Q9H2W6 279 aaKnown RBP5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 CDYLQ9Y232 598 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 PRKAB1Q9Y478 270 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 SPTBN2O15020 2390 aa5.49□□□□□ -1.53
PCDH11X-202ENST00000361655 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms