RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 TRAF6Q9Y4K3 522 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 GSAPA4D1B5 854 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 RNASEH2AO75792 299 aaKnown RBP13.46□□□□□ -0.25
LDB3-202ENST00000361373 STBD1O95210 358 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 ATP6V1G2O95670 118 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 PSME3P61289 254 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 RFTN2Q52LD8 501 aaPredicted RBP13.46□□□□□ -0.25
LDB3-202ENST00000361373 RNASEH2BQ5TBB1 312 aaKnown RBP13.46□□□□□ -0.25
LDB3-202ENST00000361373 CTU1Q7Z7A3 348 aaKnown RBP13.46□□□□□ -0.25
LDB3-202ENST00000361373 ZNF567Q8N184 647 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 ZNF276Q8N554 614 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 NDRG1Q92597 394 aaKnown RBP13.46□□□□□ -0.25
LDB3-202ENST00000361373 RMND5BQ96G75 393 aaPredicted RBP13.46□□□□□ -0.25
LDB3-202ENST00000361373 TEKT5Q96M29 485 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 PNPLA8Q9NP80 782 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 NUDT4Q9NZJ9 180 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 WRAP73Q9P2S5 460 aaPredicted RBP13.46□□□□□ -0.25
LDB3-202ENST00000361373 BANF1O75531 89 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 SERPINB7O75635 380 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 ESR1P03372 595 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 OGNP20774 298 aaKnown RBP13.46□□□□□ -0.26
LDB3-202ENST00000361373 LAPTM5Q13571 262 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 OASLQ15646 514 aaKnown RBP13.46□□□□□ -0.26
LDB3-202ENST00000361373 SNX30Q5VWJ9 437 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 GDF6Q6KF10 455 aaPredicted RBP13.46□□□□□ -0.26
LDB3-202ENST00000361373 CRTC3Q6UUV7 619 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 ULK2Q8IYT8 1036 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 IQCKQ8N0W5 287 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 GDPD5Q8WTR4 605 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 TTLL2Q9BWV7 592 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 DDX28Q9NUL7 540 aaKnown RBP13.46□□□□□ -0.26
LDB3-202ENST00000361373 LRCH1Q9Y2L9 728 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 A0A1B0GW55 424 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 SH3BGRLO75368 114 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 UNC5CO95185 931 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 DUX4L2P0CJ85 424 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 DUX4L3P0CJ86 424 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 DUX4L4P0CJ87 422 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 DUX4L5P0CJ88 424 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 DUX4L6P0CJ89 424 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 DUX4L7P0CJ90 424 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 CCL5P13501 91 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 LIMK2P53671 638 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 IRF5Q13568 498 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 PRSS55Q6UWB4 352 aaPredicted RBP13.46□□□□□ -0.26
LDB3-202ENST00000361373 GPR135Q8IZ08 494 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 OR7D4Q8NG98 312 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 C7orf43Q8WVR3 580 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 CDH19Q9H159 772 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 UNC93B1Q9H1C4 597 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 DUX4Q9UBX2 424 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 SLC9A8Q9Y2E8 581 aa13.46□□□□□ -0.26
LDB3-202ENST00000361373 TRIM38O00635 465 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 STK16O75716 305 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 ENO2P09104 434 aaPredicted RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 MYL12AP19105 171 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 ASMTP46597 345 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 PSMD8P48556 350 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 SP2Q02086 613 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 DSC2Q02487 901 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 TNK2Q07912 1038 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 ILF3Q12906 894 aaKnown RBP eCLIP13.45□□□□□ -0.26
LDB3-202ENST00000361373 TSTD2Q5T7W7 516 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 TTC23Q5W5X9 447 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 CDC73Q6P1J9 531 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 CLEC20AQ6ZU45 233 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 C16orf62Q7Z3J2 963 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 COL26A1Q96A83 441 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 HMCESQ96FZ2 354 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 SCLYQ96I15 445 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 ZNF514Q96K75 400 aaPredicted RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 C3orf14Q9HBI5 128 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 SSU72Q9NP77 194 aaKnown RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 POLMQ9NP87 494 aaPredicted RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 KLHL3Q9UH77 587 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 PRPF19Q9UMS4 504 aaKnown RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 PLLPQ9Y342 182 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 ZNF780BQ9Y6R6 833 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 FYNP06241 537 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 PTGER3P43115 390 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 TSNQ15631 228 aaKnown RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 ALFQ53S48 1182 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 GALNT13Q8IUC8 556 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 TBCDQ9BTW9 1192 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 ERVK-5Q9HDB9 667 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 IMP3Q9NV31 184 aaKnown RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 GTF2A1LQ9UNN4 478 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 OR10H1Q9Y4A9 318 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 FAM20BO75063 409 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 ERN1O75460 977 aaKnown RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 TALDO1P37837 337 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 GRSF1Q12849 480 aaKnown RBP eCLIP13.45□□□□□ -0.26
LDB3-202ENST00000361373 GPM6BQ13491 265 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 CYP2R1Q6VVX0 501 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 NET1Q7Z628 596 aaPredicted RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 C8orf48Q96LL4 319 aa13.45□□□□□ -0.26
LDB3-202ENST00000361373 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.45□□□□□ -0.26
LDB3-202ENST00000361373 CAB39Q9Y376 341 aaPredicted RBP13.45□□□□□ -0.26
LDB3-202ENST00000361373 TNFAIP8O95379 198 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms