RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 EBNA1BP2Q99848 306 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 WDR83Q9BRX9 315 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 NAT9Q9BTE0 207 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 WRAP53Q9BUR4 548 aaKnown RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 C1QTNF2Q9BXJ5 285 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 CHRAC1Q9NRG0 131 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 MBD1Q9UIS9 605 aaPredicted RBP12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 KCTD3Q9Y597 815 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 MYO15AQ9UKN7 3530 aa12.4□□□□□ -0.42
NIF3L1-201ENST00000359683 PLXND1Q9Y4D7 1925 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 CFAP54Q96N23 3096 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 TRPM6Q9BX84 2022 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 EML5Q05BV3 1969 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 FAM237BA0A1B0GVD1 139 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 A0A1W2PQU0 124 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 IGLON5A6NGN9 336 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 STX7O15400 261 aaKnown RBP12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 BUD23O43709 281 aaKnown RBP12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 TM7SF2O76062 418 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 MYBL2P10244 700 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 C6P13671 934 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 MCM3P25205 808 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 ELK3P41970 407 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 SPINT3P49223 89 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 ACVR1Q04771 509 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 SEPT6Q14141 434 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 AGERQ15109 404 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 ZNF284Q2VY69 593 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 SEL1L3Q68CR1 1132 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 SLC36A4Q6YBV0 504 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 CEP128Q6ZU80 1094 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 CYP2U1Q7Z449 544 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 CCNJLQ8IV13 435 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 NRSN1Q8IZ57 195 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 CADM4Q8NFZ8 388 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 STAMBPL1Q96FJ0 436 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 SPACA7Q96KW9 195 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 ZNF778Q96MU6 729 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 GPR174Q9BXC1 333 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 PCED1AQ9H1Q7 454 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 SAYSD1Q9NPB0 183 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 TREX1Q9NSU2 369 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 NLE1Q9NVX2 485 aaPredicted RBP12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 SAMD15Q9P1V8 674 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 INVSQ9Y283 1065 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 MAD1L1Q9Y6D9 718 aa12.39□□□□□ -0.43
NIF3L1-201ENST00000359683 MYLKQ15746 1914 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 FAM47DPA6NHR8 397 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 LATO43561 262 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 LZTS3O60299 673 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 RECQL5O94762 991 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 SP9P0CG40 484 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 BPIP17213 487 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 NMBRP28336 390 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 MAGEA4P43358 317 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 CCR5P51681 352 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 PPP2CBP62714 309 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 PPP2CAP67775 309 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 FGL2Q14314 439 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 PTPRCAPQ14761 206 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 FASTKD3Q14CZ7 662 aaKnown RBP12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 ACOX1Q15067 660 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 ELF2Q15723 593 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 SKIDA1Q1XH10 827 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 HP1BP3Q5SSJ5 553 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 ZDHHC20Q5W0Z9 365 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 KIAA0895LQ68EN5 471 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 ESRP1Q6NXG1 681 aaKnown RBP12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 CASC4Q6P4E1 433 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 RFLNAQ6ZTI6 216 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 Q6ZVL8 140 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 NLRP8Q86W28 1048 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 ZBED8Q8IZ13 594 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 FBXO36Q8NEA4 188 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 OR4K2Q8NGD2 314 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 OR13C4Q8NGS5 318 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 C6orf106Q9H6K1 298 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 BPIFA1Q9NP55 256 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 RAD18Q9NS91 495 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 KCTD5Q9NXV2 234 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 PKD2L2Q9NZM6 624 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 NFKBIL1Q9UBC1 381 aaPredicted RBP12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 SLC2A6Q9UGQ3 507 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 PKP3Q9Y446 797 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 LRRK1Q38SD2 2015 aa12.38□□□□□ -0.43
NIF3L1-201ENST00000359683 METTL12A8MUP2 240 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 H7C0S8 307 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 WNT9AO14904 365 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 NDUFS2O75306 463 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 USP1O94782 785 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 TTC4O95801 387 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 PAK4O96013 591 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 IGHV4-34P06331 123 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 FAM153BP0C7A2 387 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 PGAM1P18669 254 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 HADHAP40939 763 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 ETV3P41162 512 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 FAM153CQ494X1 144 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 ANKRD20A4Q4UJ75 823 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms