RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 CTPS1P17812 591 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 TAS2R39P59534 338 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 DLG1Q12959 904 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 BNIP1Q12981 228 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 CAMK1DQ8IU85 385 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.67□□□□□ -0.382e-8■■■■■ 35.8
GGPS1-202ENST00000358966 NAT16Q8N8M0 369 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 C10orf82Q8WW14 230 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 USP13Q92995 863 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-202ENST00000358966 FATE1Q969F0 183 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 E2F7Q96AV8 911 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 GPR22Q99680 433 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 TDRD1Q9BXT4 1180 aaKnown RBP12.67□□□□□ -0.38
GGPS1-202ENST00000358966 RHOJQ9H4E5 214 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 ABCB8Q9NUT2 735 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 LSM7Q9UK45 103 aaKnown RBP12.67□□□□□ -0.38
GGPS1-202ENST00000358966 ARL2BPQ9Y2Y0 163 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 STARD13Q9Y3M8 1113 aa12.67□□□□□ -0.38
GGPS1-202ENST00000358966 MROH6A6NGR9 719 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 GFRA2O00451 464 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 MAGEB3O15480 346 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 GLRA3O75311 464 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 PROCP04070 461 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 ALPIP09923 528 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 TROVE2P10155 538 aaKnown RBP eCLIP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 MTTPP55157 894 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 RHOAP61586 193 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 NAB1Q13506 487 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 ITGA9Q13797 1035 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 EML3Q32P44 896 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 GALNTL6Q49A17 601 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 LRRC73Q5JTD7 316 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 ASTLQ6HA08 431 aaPredicted RBP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 KIAA0930Q6ICG6 404 aaPredicted RBP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 ARID3BQ8IVW6 561 aaPredicted RBP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 CENPLQ8N0S6 344 aaPredicted RBP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 GCNAQ96QF7 691 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 OMDQ99983 421 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 KLHL14Q9P2G3 628 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 LHX3Q9UBR4 397 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 LRCH1Q9Y2L9 728 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 PCDHB9Q9Y5E1 797 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 TYW5A2RUC4 315 aaKnown RBP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 CCDC162PA2VCL2 907 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 NEDD8-MDP1E9PL57 170 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 GOT2P00505 430 aaKnown RBP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 NAT2P11245 290 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 HLA-FP30511 346 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 SLC7A9P82251 487 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 HPCAP84074 193 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 TMC5Q6UXY8 1006 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 NAPRTQ6XQN6 538 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 ASRGL1Q7L266 308 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 C2CD4AQ8NCU7 369 aaPredicted RBP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 OR4K2Q8NGD2 314 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 ERP27Q96DN0 273 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 FEM1CQ96JP0 617 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 SHCBP1LQ9BZQ2 653 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 FAM96AQ9H5X1 160 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 TASP1Q9H6P5 420 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 SIRPGQ9P1W8 387 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 PDP2Q9P2J9 529 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 RABL2AQ9UBK7 228 aaPredicted RBP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 EVLQ9UI08 416 aaPredicted RBP12.66□□□□□ -0.38
GGPS1-202ENST00000358966 IRAK3Q9Y616 596 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 WNT6Q9Y6F9 365 aa12.66□□□□□ -0.38
GGPS1-202ENST00000358966 MAGEA13PA6NCF6 341 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.65□□□□□ -0.38
GGPS1-202ENST00000358966 TIMM44O43615 452 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 FGF3P11487 239 aaPredicted RBP12.65□□□□□ -0.38
GGPS1-202ENST00000358966 MAGEA12P43365 314 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 CREMQ03060 361 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 MBLAC2Q68D91 279 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 GRAMD4Q6IC98 578 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 TTC7BQ86TV6 843 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 CNTN4Q8IWV2 1026 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 PPP1R14CQ8TAE6 165 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 ITFG1Q8TB96 612 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 NXNL1Q96CM4 212 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 ERLEC1Q96DZ1 483 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 ZNF599Q96NL3 588 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 NUDCD1Q96RS6 583 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 DDX50Q9BQ39 737 aaKnown RBP12.65□□□□□ -0.38
GGPS1-202ENST00000358966 OSBPL10Q9BXB5 764 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 MYLK2Q9H1R3 596 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 MKS1Q9NXB0 559 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 MYO15AQ9UKN7 3530 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 AP3B1O00203 1094 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 NVLO15381 856 aaKnown RBP12.65□□□□□ -0.38
GGPS1-202ENST00000358966 NDST3O95803 873 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 MYCLP1P12525 358 aaPredicted RBP12.65□□□□□ -0.38
GGPS1-202ENST00000358966 CEBPBP17676 345 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 GM2AP17900 193 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 PAMP19021 973 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 TNK2Q07912 1038 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 SHHQ15465 462 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 ALG1LQ6GMV1 187 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 SLC2A7Q6PXP3 512 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 HTR3DQ70Z44 454 aa12.65□□□□□ -0.38
GGPS1-202ENST00000358966 GLT6D1Q7Z4J2 308 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms