RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 MILR1Q7Z6M3 343 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 PRPF18Q99633 342 aaKnown RBP14.24□□□□□ -0.13
SIRPA-202ENST00000358771 ZFP14Q9HCL3 533 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 FBRSL1Q9HCM7 1045 aaKnown RBP14.24□□□□□ -0.13
SIRPA-202ENST00000358771 A8MT66 165 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 CLDN11O75508 207 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 PRSS56P0CW18 603 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 LBPP18428 481 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 ITGAXP20702 1163 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 PBLDP30039 288 aaPredicted RBP14.24□□□□□ -0.13
SIRPA-202ENST00000358771 CCNG1P51959 295 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 CLLU1OSQ5K130 101 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 RNF220Q5VTB9 566 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 METTL21CQ5VZV1 264 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 MSANTD2Q6P1R3 559 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 SLC30A9Q6PML9 568 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 NPAS4Q8IUM7 802 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 CPNE9Q8IYJ1 553 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 PTCD2Q8WV60 388 aaKnown RBP14.24□□□□□ -0.13
SIRPA-202ENST00000358771 ZNF558Q96NG5 402 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 CCDC90BQ9GZT6 254 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 MARCH4Q9P2E8 410 aaPredicted RBP14.24□□□□□ -0.13
SIRPA-202ENST00000358771 CEP290O15078 2479 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 A0A1W2PQ45 241 aaPredicted RBP14.24□□□□□ -0.13
SIRPA-202ENST00000358771 A0A1W2PQY0 241 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 DPPA5A6NC42 116 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 GJB3O75712 270 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 ZNF23P17027 643 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 THOP1P52888 689 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 PM20D1Q6GTS8 502 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 AFTPHQ6ULP2 937 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 C2orf49Q9BVC5 232 aaPredicted RBP14.24□□□□□ -0.13
SIRPA-202ENST00000358771 CLIC5Q9NZA1 410 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 USP3Q9Y6I4 520 aa14.24□□□□□ -0.13
SIRPA-202ENST00000358771 PCNTO95613 3336 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 SLC7A4O43246 635 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 NIPSNAP2O75323 286 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 MT-ND1P03886 318 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 PSMA4P25789 261 aaKnown RBP14.23□□□□□ -0.13
SIRPA-202ENST00000358771 TIGD2Q4W5G0 525 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 OTUD1Q5VV17 481 aaPredicted RBP14.23□□□□□ -0.13
SIRPA-202ENST00000358771 FAM171BQ6P995 826 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 ANKLE1Q8NAG6 615 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 C19orf60Q96EN9 201 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 CCT7Q99832 543 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.23□□□□□ -0.13
SIRPA-202ENST00000358771 I6L893 689 aaPredicted RBP14.23□□□□□ -0.13
SIRPA-202ENST00000358771 INSIG1O15503 277 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 HOXD8P13378 290 aaPredicted RBP14.23□□□□□ -0.13
SIRPA-202ENST00000358771 XRCC1P18887 633 aaPredicted RBP14.23□□□□□ -0.13
SIRPA-202ENST00000358771 AOC1P19801 751 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 GLDCP23378 1020 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 PAX3P23760 479 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 OTOP2Q7RTS6 562 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 FAM126BQ8IXS8 530 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 ZNF786Q8N393 782 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 OR56A4Q8NGH8 313 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 BRSK1Q8TDC3 778 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 CDKN2AIPNLQ96HQ2 116 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 KLQ9UEF7 1012 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 IQCF5A8MTL0 148 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 PPP1R3AQ16821 1122 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 CYP51A1Q16850 503 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 TTLL9Q3SXZ7 439 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 TXNDC8Q6A555 127 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 SZRD1Q7Z422 152 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 ZNF598Q86UK7 904 aaKnown RBP14.23□□□□□ -0.13
SIRPA-202ENST00000358771 GANCQ8TET4 914 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 ANKRD27Q96NW4 1050 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 TBCDQ9BTW9 1192 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 CCDC106Q9BWC9 280 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 ZDHHC6Q9H6R6 413 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 MRPL17Q9NRX2 175 aaKnown RBP14.23□□□□□ -0.13
SIRPA-202ENST00000358771 PDP2Q9P2J9 529 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 AP4S1Q9Y587 144 aa14.23□□□□□ -0.13
SIRPA-202ENST00000358771 COPG1Q9Y678 874 aaKnown RBP14.23□□□□□ -0.13
SIRPA-202ENST00000358771 TRIP12Q14669 1992 aaPredicted RBP14.22□□□□□ -0.13
SIRPA-202ENST00000358771 A0A0J9YYE9 177 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 MATN2O00339 956 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 NRP2O60462 931 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 SNNO75324 88 aaPredicted RBP14.22□□□□□ -0.13
SIRPA-202ENST00000358771 PKMP14618 531 aaKnown RBP14.22□□□□□ -0.13
SIRPA-202ENST00000358771 PSMC3P17980 439 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 MAP4P27816 1152 aaKnown RBP14.22□□□□□ -0.13
SIRPA-202ENST00000358771 TTPAP49638 278 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 ECT2LQ008S8 904 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 SYTL3Q4VX76 610 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 EPGNQ6UW88 154 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 ARHGAP12Q8IWW6 846 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 PQLC1Q8N2U9 271 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 SIDT2Q8NBJ9 832 aaKnown RBP14.22□□□□□ -0.13
SIRPA-202ENST00000358771 TSGA13Q96PP4 275 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 hCG_2014768A0A024R1R8 64 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 ARVCFO00192 962 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 SQLEQ14534 574 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 ACAP2Q15057 778 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 CAMK1DQ8IU85 385 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 STYXQ8WUJ0 223 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 SMIM14Q96QK8 99 aa14.22□□□□□ -0.13
SIRPA-202ENST00000358771 OLFM1Q99784 485 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms