RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 TCP10LQ8TDR4 215 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 CDX2Q99626 313 aaPredicted RBP17.05■□□□□ 0.32
TPM1-205ENST00000357980 MLXIPLQ9NP71 852 aa17.05■□□□□ 0.32
TPM1-205ENST00000357980 COPEO14579 308 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 ASMTLO95671 621 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 PRSS56P0CW18 603 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 TYK2P29597 1187 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 POLD2P49005 469 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 GALK1P51570 392 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 STC1P52823 247 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 ENPP2Q13822 863 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 ELAVL3Q14576 367 aaKnown RBP17.04■□□□□ 0.32
TPM1-205ENST00000357980 LRRC66Q68CR7 880 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 NUDT18Q6ZVK8 323 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 Q7L0L9 218 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 SUGP1Q8IWZ8 645 aaKnown RBP17.04■□□□□ 0.32
TPM1-205ENST00000357980 SCG3Q8WXD2 468 aaKnown RBP17.04■□□□□ 0.32
TPM1-205ENST00000357980 ACOX2Q99424 681 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 P2RY13Q9BPV8 354 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 CCDC134Q9H6E4 229 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 CAB39LQ9H9S4 337 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 KCNK12Q9HB15 430 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 SLC17A7Q9P2U7 560 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 SARDHQ9UL12 918 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 SLC39A10Q9ULF5 831 aa17.04■□□□□ 0.32
TPM1-205ENST00000357980 FAM95CA0A1B0GW59 222 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 GAPDHSO14556 408 aaPredicted RBP17.03■□□□□ 0.32
TPM1-205ENST00000357980 PRNPP04156 253 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 CHRM1P11229 460 aaPredicted RBP17.03■□□□□ 0.32
TPM1-205ENST00000357980 HNRNPLP14866 589 aaKnown RBP eCLIP17.03■□□□□ 0.321e-7■■□□□ 12.2
TPM1-205ENST00000357980 TIMP2P16035 220 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 MC4RP32245 332 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 CTHP32929 405 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 CRHR1P34998 444 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 ETV4P43268 484 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 CLCN5P51795 746 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 LRRC73Q5JTD7 316 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 TXNDC11Q6PKC3 985 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 OR8D1Q8WZ84 308 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 EZH1Q92800 747 aaPredicted RBP17.03■□□□□ 0.32
TPM1-205ENST00000357980 FAM129BQ96TA1 746 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 PHF7Q9BWX1 381 aaPredicted RBP17.03■□□□□ 0.32
TPM1-205ENST00000357980 SLC13A1Q9BZW2 595 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 C12orf65Q9H3J6 166 aaKnown RBP17.03■□□□□ 0.32
TPM1-205ENST00000357980 ZDHHC4Q9NPG8 344 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 B4GALT6Q9UBX8 382 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 LIMD1Q9UGP4 676 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 PPM1HQ9ULR3 514 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 F5P12259 2224 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 A8MX80 341 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 UPK3BL1B0FP48 263 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 UPK3BL2E5RIL1 263 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 SPECC1L-ADORA2AF8WAN1 911 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 K7EQS6 105 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 TOP3BO95985 862 aaKnown RBP17.03■□□□□ 0.32
TPM1-205ENST00000357980 TNFRSF4P43489 277 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 SEMG2Q02383 582 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 FASTKD1Q53R41 847 aaKnown RBP17.03■□□□□ 0.32
TPM1-205ENST00000357980 PPM1JQ5JR12 505 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 RBM20Q5T481 1227 aaKnown RBP17.03■□□□□ 0.32
TPM1-205ENST00000357980 PIANPQ8IYJ0 282 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 SLC44A3Q8N4M1 653 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 TMIEQ8NEW7 156 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 INTS10Q9NVR2 710 aaKnown RBP17.03■□□□□ 0.32
TPM1-205ENST00000357980 CACNA2D2Q9NY47 1150 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 GRID1Q9ULK0 1009 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 PLLPQ9Y342 182 aa17.03■□□□□ 0.32
TPM1-205ENST00000357980 MYO10Q9HD67 2058 aa17.02■□□□□ 0.32
TPM1-205ENST00000357980 C16orf96A6NNT2 1141 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 DHRS4L1P0CG22 281 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 BPIP17213 487 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 CCT5P48643 541 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 CDKN1CP49918 316 aaPredicted RBP17.02■□□□□ 0.31
TPM1-205ENST00000357980 PTSQ03393 145 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 ILF2Q12905 390 aaKnown RBP17.02■□□□□ 0.31
TPM1-205ENST00000357980 USP10Q14694 798 aaKnown RBP17.02■□□□□ 0.31
TPM1-205ENST00000357980 SKIV2LQ15477 1246 aaKnown RBP17.02■□□□□ 0.31
TPM1-205ENST00000357980 ZKSCAN8Q15776 578 aaPredicted RBP17.02■□□□□ 0.31
TPM1-205ENST00000357980 PRPF38BQ5VTL8 546 aaKnown RBP17.02■□□□□ 0.31
TPM1-205ENST00000357980 PSAPL1Q6NUJ1 521 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 PARS2Q7L3T8 475 aaKnown RBP17.02■□□□□ 0.31
TPM1-205ENST00000357980 SDCCAG8Q86SQ7 713 aaPredicted RBP17.02■□□□□ 0.31
TPM1-205ENST00000357980 SLC41A1Q8IVJ1 513 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 CBARPQ8N350 705 aaPredicted RBP17.02■□□□□ 0.31
TPM1-205ENST00000357980 PLCD3Q8N3E9 789 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 GDAP1Q8TB36 358 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 GUCD1Q96NT3 240 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 TCF12Q99081 682 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 OMDQ99983 421 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 PCDH12Q9NPG4 1184 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 IL26Q9NPH9 171 aa17.02■□□□□ 0.31
TPM1-205ENST00000357980 PLXNA2O75051 1894 aa17.01■□□□□ 0.31
TPM1-205ENST00000357980 SRRM3A6NNA2 597 aaPredicted RBP17.01■□□□□ 0.31
TPM1-205ENST00000357980 MPOP05164 745 aa17.01■□□□□ 0.31
TPM1-205ENST00000357980 C2P06681 752 aa17.01■□□□□ 0.31
TPM1-205ENST00000357980 ITGB7P26010 798 aa17.01■□□□□ 0.31
TPM1-205ENST00000357980 GMPRP36959 345 aa17.01■□□□□ 0.31
TPM1-205ENST00000357980 KIR2DL1P43626 348 aaPredicted RBP17.01■□□□□ 0.31
TPM1-205ENST00000357980 METAP1P53582 386 aa17.01■□□□□ 0.31
TPM1-205ENST00000357980 POU4F1Q01851 419 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms