RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 FOLH1Q04609 750 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 MTX3Q5HYI7 312 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 VN1R5Q7Z5H4 357 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 TNS4Q8IZW8 715 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 CPSF7Q8N684 471 aaKnown RBP11.74□□□□□ -0.53
COL9A1-202ENST00000357250 BPIFB6Q8NFQ5 453 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 LRRC15Q8TF66 581 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 MYO19Q96H55 970 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 TTPALQ9BTX7 342 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 TDRD1Q9BXT4 1180 aaKnown RBP11.74□□□□□ -0.53
COL9A1-202ENST00000357250 SAMHD1Q9Y3Z3 626 aaKnown RBP11.74□□□□□ -0.53
COL9A1-202ENST00000357250 SETD1AO15047 1707 aaKnown RBP11.74□□□□□ -0.53
COL9A1-202ENST00000357250 PAPSS1O43252 624 aaPredicted RBP11.74□□□□□ -0.53
COL9A1-202ENST00000357250 SUV39H1O43463 412 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 BANF1O75531 89 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 TCEA3O75764 348 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 FAM163BP0C2L3 166 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 CD52P31358 61 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 FLT3P36888 993 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 GNPDA1P46926 289 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 RGS1Q08116 209 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 BIKQ13323 160 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 IRAK1BP1Q5VVH5 260 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 ZYG11AQ6WRX3 759 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 POMGNT2Q8NAT1 580 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 OR2T12Q8NG77 320 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 S100A14Q9HCY8 104 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 NUDT4Q9NZJ9 180 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 TBC1D14Q9P2M4 693 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 TRPS1Q9UHF7 1281 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 NOCTQ9UK39 431 aaKnown RBP11.74□□□□□ -0.53
COL9A1-202ENST00000357250 RAB26Q9ULW5 256 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 R3HDM2Q9Y2K5 976 aaKnown RBP11.74□□□□□ -0.53
COL9A1-202ENST00000357250 M0R2N6 131 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 ONECUT3O60422 494 aaPredicted RBP11.74□□□□□ -0.53
COL9A1-202ENST00000357250 UGT2B11O75310 529 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 SEC24AO95486 1093 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 NTRK1P04629 796 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 MMP3P08254 477 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 BMP7P18075 431 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 KELP23276 732 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 ALG11Q2TAA5 492 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 AP5B1Q2VPB7 878 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 HECTD2Q5U5R9 776 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 RAET1GQ6H3X3 334 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 GATAD2AQ86YP4 633 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 HIPK1Q86Z02 1210 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 ARMC8Q8IUR7 673 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 COLGALT2Q8IYK4 626 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 ZNF540Q8NDQ6 660 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 PIK3R5Q8WYR1 880 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 ACBD6Q9BR61 282 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 BRD9Q9H8M2 597 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 KLHL1Q9NR64 748 aa11.74□□□□□ -0.53
COL9A1-202ENST00000357250 WWP2O00308 870 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 ECDO95905 644 aaPredicted RBP11.73□□□□□ -0.53
COL9A1-202ENST00000357250 NR2F1P10589 423 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 ZNF24P17028 368 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 EIF2B2P49770 351 aaKnown RBP11.73□□□□□ -0.53
COL9A1-202ENST00000357250 ACAP2Q15057 778 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 NDUFAF6Q330K2 333 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 MPPE1Q53F39 396 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 DOK6Q6PKX4 331 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.73□□□□□ -0.53
COL9A1-202ENST00000357250 ANKS1BQ7Z6G8 1248 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 ALYREFQ86V81 257 aaKnown RBP11.73□□□□□ -0.53
COL9A1-202ENST00000357250 FAM13CQ8NE31 585 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 WDR48Q8TAF3 677 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 LPPQ93052 612 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 PWWP2AQ96N64 755 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 NXF3Q9H4D5 531 aaKnown RBP11.73□□□□□ -0.53
COL9A1-202ENST00000357250 AGO3Q9H9G7 860 aaKnown RBP11.73□□□□□ -0.53
COL9A1-202ENST00000357250 PNPOQ9NVS9 261 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 ATP6V1HQ9UI12 483 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 SLC27A6Q9Y2P4 619 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 POLR1DQ9Y2S0 133 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 AP3D1O14617 1153 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 CBFA2T3O75081 653 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 LRIG2O94898 1065 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 OR6B1O95007 311 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 NR2F6P10588 404 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 HNRNPLP14866 589 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL9A1-202ENST00000357250 HTR1BP28222 390 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 PBX3P40426 434 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 NDST2P52849 883 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 PSMD4P55036 377 aaKnown RBP11.73□□□□□ -0.53
COL9A1-202ENST00000357250 SP3Q02447 781 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 LGALS3BPQ08380 585 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 CMC1Q7Z7K0 106 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 RASAL3Q86YV0 1011 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 REM2Q8IYK8 340 aaPredicted RBP11.73□□□□□ -0.53
COL9A1-202ENST00000357250 FIBCD1Q8N539 461 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 NIPA2Q8N8Q9 360 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 C1orf127Q8N9H9 656 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 ZNF671Q8TAW3 534 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 TM6SF2Q9BZW4 377 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 RNF208Q9H0X6 261 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 MAGEH1Q9H213 219 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 ZFP14Q9HCL3 533 aa11.73□□□□□ -0.53
COL9A1-202ENST00000357250 ZNF214Q9UL59 606 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms