RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TRMT13Q9NUP7 481 aaKnown RBP8.02□□□□□ -1.13
HTT-201ENST00000355072 STXBP5LQ9Y2K9 1186 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 CD163L1Q9NR16 1453 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 NFICP08651 508 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 KCNA6P17658 529 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 FGD3Q5JSP0 725 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 EMC10Q5UCC4 262 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 C4orf19Q8IY42 314 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 CHST13Q8NET6 341 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 TTLQ8NG68 377 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 CCDC106Q9BWC9 280 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 PDE10AQ9Y233 779 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 NUP205Q92621 2012 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 IFNA10P01566 189 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 IFNA4P05014 189 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 TPSB2P20231 275 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 TPSAB1Q15661 275 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 AVL9Q8NBF6 648 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 KBTBD7Q8WVZ9 684 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 KCNN1Q92952 543 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 S100PBPQ96BU1 408 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 DCCP43146 1447 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 ABCC6O95255 1503 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 PPP3R1P63098 170 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 ZNF169Q14929 603 aaPredicted RBP8.02□□□□□ -1.13
HTT-201ENST00000355072 TAF5Q15542 800 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 DSELQ8IZU8 1212 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 ENDOVQ8N8Q3 282 aaKnown RBP8.02□□□□□ -1.13
HTT-201ENST00000355072 DENND6BQ8NEG7 585 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 LRRC3Q9BY71 257 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 PCM1Q15154 2024 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 NALCNQ8IZF0 1738 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 PCDHGA12O60330 932 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 ADRA1DP25100 572 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 SOX9P48436 509 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 GADL1Q6ZQY3 521 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 SIRT2Q8IXJ6 389 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 SPPL2AQ8TCT8 520 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 MXRA8Q9BRK3 442 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 ZNF639Q9UID6 485 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 MRPS33Q9Y291 106 aaKnown RBP8.02□□□□□ -1.13
HTT-201ENST00000355072 TDRD10Q5VZ19 366 aaKnown RBP8.02□□□□□ -1.13
HTT-201ENST00000355072 SIX5Q8N196 739 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 ZNF507Q8TCN5 953 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 LMAN2LQ9H0V9 348 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 OR51E2Q9H255 320 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L15C9J2P7 530 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L13C9JLJ4 530 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L11C9JVI0 530 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L18D6R9N7 530 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L22D6RA61 530 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L17D6RBQ6 530 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L19D6RCP7 530 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L20D6RJB6 530 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 SLC19A2O60779 497 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 SASH3O75995 380 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 RBL1P28749 1068 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 SERPINA4P29622 427 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L24Q0WX57 530 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 USP17L6PQ6QN14 398 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 OR2W6PQ8NHA6 318 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 MAT2BQ9NZL9 334 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 RPL36Q9Y3U8 105 aaKnown RBP8.02□□□□□ -1.13
HTT-201ENST00000355072 ASB4Q9Y574 426 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 KRT33AO76009 404 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 CLK3P49761 638 aaKnown RBP8.02□□□□□ -1.13
HTT-201ENST00000355072 ITGA7Q13683 1181 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 ZNF234Q14588 700 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 DUPD1Q68J44 220 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 SPOCD1Q6ZMY3 1216 aa8.02□□□□□ -1.13
HTT-201ENST00000355072 TRIM64CA6NLI5 447 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 SLC22A3O75751 556 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 ANXA8P13928 327 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 RPA3P35244 121 aaPredicted RBP8.01□□□□□ -1.13
HTT-201ENST00000355072 SRP54P61011 504 aaKnown RBP8.01□□□□□ -1.13
HTT-201ENST00000355072 RANBP3LQ86VV4 465 aaPredicted RBP8.01□□□□□ -1.13
HTT-201ENST00000355072 BRSK2Q8IWQ3 736 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 PPA2Q9H2U2 334 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 C1orf109Q9NX04 203 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 AFF4Q9UHB7 1163 aaKnown RBP8.01□□□□□ -1.13
HTT-201ENST00000355072 FARSAQ9Y285 508 aaKnown RBP8.01□□□□□ -1.13
HTT-201ENST00000355072 SCN11AQ9UI33 1791 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 ACSL4O60488 711 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 AFTPHQ6ULP2 937 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 CYB5R4Q7L1T6 521 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 PTAR1Q7Z6K3 402 aaPredicted RBP8.01□□□□□ -1.13
HTT-201ENST00000355072 FAM71AQ8IYT1 594 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 CAMKK1Q8N5S9 505 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 ROGDIQ9GZN7 287 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 MID1IP1Q9NPA3 183 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 ADGRE2Q9UHX3 823 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 LOC102724428A0A0B4J2F2 783 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 LRRC14BA6NHZ5 514 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 DPYSL4O14531 572 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 PLIN3O60664 434 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 NR4A2P43354 598 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 ARL4DP49703 201 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 SIK1P57059 783 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 SEC23AQ15436 765 aa8.01□□□□□ -1.13
HTT-201ENST00000355072 HMGN3Q15651 99 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms