RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MAPK10P53779 464 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 ACSM2AQ08AH3 577 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 SPANXN3Q5MJ09 141 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 CERCAMQ5T4B2 595 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 ACSM2BQ68CK6 577 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 NET1Q7Z628 596 aaPredicted RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 COMMD2Q86X83 199 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 UNC5BQ8IZJ1 945 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 ZDHHC14Q8IZN3 488 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 SLC4A11Q8NBS3 891 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 KCTD4Q8WVF5 259 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 C10orf82Q8WW14 230 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 DDX1Q92499 740 aaKnown RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 MYO19Q96H55 970 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 NDNQ99608 321 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 COPS8Q99627 209 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 HEPHQ9BQS7 1158 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 ACBD6Q9BR61 282 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 TMEM79Q9BSE2 394 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 C8orf33Q9H7E9 229 aaPredicted RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 CDHR5Q9HBB8 845 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 TIAM2Q8IVF5 1701 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 TRPM3Q9HCF6 1732 aaPredicted RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 GTPBP1O00178 669 aaKnown RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 SNUPNO95149 360 aaKnown RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 UMPSP11172 480 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 COX4I1P13073 169 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 CRABP2P29373 138 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 CCND3P30281 292 aaPredicted RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 HTR7P34969 479 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 IRF8Q02556 426 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 PTP4A2Q12974 167 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 ITPRIPL2Q3MIP1 535 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 C1orf220Q5T0J3 134 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 TTC23Q5W5X9 447 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 ADGRG2Q8IZP9 1017 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 FIZ1Q96SL8 496 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 S100A13Q99584 98 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 HERPUD2Q9BSE4 406 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 LMAN2LQ9H0V9 348 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 MCCC2Q9HCC0 563 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 COMMD8Q9NX08 183 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 KAT6AQ92794 2004 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 SLCO1B7G3V0H7 640 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 POP4O95707 220 aaKnown RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 BPGMP07738 259 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 NDUFS1P28331 727 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 POU5F1Q01860 360 aaKnown RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 TCEAL5Q5H9L2 206 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 KRT73Q86Y46 540 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 HPS6Q86YV9 775 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 FBXO39Q8N4B4 442 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 NKAPQ8N5F7 415 aaKnown RBP10.89□□□□□ -0.67
CLCN6-202ENST00000346436 DPP10Q8N608 796 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF398Q8TD17 642 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 DOT1LQ8TEK3 1739 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 FUBP3Q96I24 572 aaKnown RBP eCLIP10.89□□□□□ -0.671e-7■■■■□ 24.4
CLCN6-202ENST00000346436 NKX2-4Q9H2Z4 354 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 POLR1BQ9H9Y6 1135 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 SNX15Q9NRS6 342 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 GALNT8Q9NY28 637 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 RBPJLQ9UBG7 517 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 CPQQ9Y646 472 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 ALS2Q96Q42 1657 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 CHD4Q14839 1912 aa10.89□□□□□ -0.67
CLCN6-202ENST00000346436 TJP1Q07157 1748 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 SMIM28A0A1B0GU29 152 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 SCAMP3O14828 347 aaKnown RBP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 TEX28O15482 410 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 GRIA1P42261 906 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 GPX6P59796 221 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 CTBP1Q13363 440 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF618Q5T7W0 954 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 HID1Q8IV36 788 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 RASGRP3Q8IV61 690 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 POF1BQ8WVV4 589 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 AZIN2Q96A70 460 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ANKRD27Q96NW4 1050 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ERVK-11Q9UQG0 969 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ONECUT3O60422 494 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 CILPO75339 1184 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 AVPR1BP47901 424 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 HSPA14Q0VDF9 509 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 TMEM130Q8N3G9 435 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 BANPQ8N9N5 519 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 CLEC4CQ8WTT0 213 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 LRRC39Q96DD0 335 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 P2RY11Q96G91 374 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 DPEP3Q9H4B8 488 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 NFKBIL1Q9UBC1 381 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 BLOC1S6Q9UL45 172 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 NOS3P29474 1203 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 GSTT1P30711 240 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 GRIA4P48058 902 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 RALGPS1Q5JS13 557 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 PHF19Q5T6S3 580 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF776Q68DI1 518 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ZBTB49Q6ZSB9 765 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 MPP5Q8N3R9 675 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms