RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 EGFLAMQ63HQ2 1017 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 DCLRE1AQ6PJP8 1040 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 EID3Q8N140 333 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 NLGN2Q8NFZ4 835 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 OR13C4Q8NGS5 318 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 PPTC7Q8NI37 304 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 FBXL20Q96IG2 436 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 ZBTB26Q9HCK0 441 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 EXD2Q9NVH0 621 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 LEF1Q9UJU2 399 aaPredicted RBP12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 CNOT6Q9ULM6 557 aaKnown RBP12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 PLCH1Q4KWH8 1693 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 MYO1DO94832 1006 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 ATG7O95352 703 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 ASLP04424 464 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 SERPIND1P05546 499 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 SOAT1P35610 550 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 STT3AP46977 705 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 HK2P52789 917 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 BOP1Q14137 746 aaKnown RBP12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 FAM45BPQ6NSW5 357 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 TMEM26Q6ZUK4 368 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 KCTD8Q6ZWB6 473 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 NECAB2Q7Z6G3 386 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 MTMR14Q8NCE2 650 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 FAM45AQ8TCE6 357 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 GPR21Q99679 349 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 AKTIPQ9H8T0 292 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 FANCEQ9HB96 536 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 CDH9Q9ULB4 789 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 HEMK1Q9Y5R4 338 aaPredicted RBP12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 A0A1W2PPW3 197 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 NFKBIEO00221 500 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 FAM20BO75063 409 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 SMPD1P17405 629 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 DNAJB2P25686 324 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 GRK4P32298 578 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 MADCAM1Q13477 382 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 CPSF7Q8N684 471 aaKnown RBP12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 OR7A2PQ8NGA2 310 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 OR4L1Q8NH43 312 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 PSMA8Q8TAA3 256 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 LINGO1Q96FE5 620 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 DHRS4Q9BTZ2 278 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 POLR3HQ9Y535 204 aaPredicted RBP12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 PCDHGC4Q9Y5F7 938 aa12.42□□□□□ -0.42
SNRNP48-201ENST00000342415 LRRC14BA6NHZ5 514 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 DPYSL4O14531 572 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 JUNP05412 331 aaKnown RBP12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 HLA-DQB2P05538 268 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 MMP3P08254 477 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 CNPP09543 421 aaKnown RBP12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 HSPA14Q0VDF9 509 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 PAGE2BQ5JRK9 111 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 TIFABQ6ZNK6 161 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 CEP97Q8IW35 865 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 RAD21L1Q9H4I0 556 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 SH3BP4Q9P0V3 963 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 MOSPD1Q9UJG1 213 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 PRRG1O14668 218 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 AURKAO14965 403 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 EFNA1P20827 205 aaPredicted RBP12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 AQP1P29972 269 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 PRDX6P30041 224 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 RPS9P46781 194 aaKnown RBP12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 SEMG2Q02383 582 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 MAP3K10Q02779 954 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 SLC10A7Q0GE19 358 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 INCA1Q0VD86 236 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 FSCN1Q16658 493 aaKnown RBP12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 BROXQ5VW32 411 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 ZYG11BQ9C0D3 744 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 ARL5AQ9Y689 179 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 OR4F21O95013 312 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 ALOX12P18054 663 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 MZF1P28698 734 aaPredicted RBP12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 TNK2Q07912 1038 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 RNF219Q5W0B1 726 aaPredicted RBP12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 GPRIN3Q6ZVF9 776 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 GPR142Q7Z601 462 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 ANKRD46Q86W74 232 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 EGFL6Q8IUX8 553 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 PNPT1Q8TCS8 783 aaKnown RBP12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 ASB9Q96DX5 294 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 TSSK3Q96PN8 268 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 SORT1Q99523 831 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 CXCL16Q9H2A7 254 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 EMCNQ9ULC0 261 aa12.41□□□□□ -0.42
SNRNP48-201ENST00000342415 E9PAM4 449 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 FGF10O15520 208 aaPredicted RBP12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 FTH1P02794 183 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 PABPC4LP0CB38 370 aaKnown RBP12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 COL6A2P12110 1019 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 ATP6V1E1P36543 226 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 ARHGAP1Q07960 439 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 DPYSQ14117 519 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 TMEM86AQ8N2M4 240 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 HMCESQ96FZ2 354 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 CHID1Q9BWS9 393 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 SMPD3Q9NY59 655 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms