RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 ZNF212Q9UDV6 495 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 SLC7A8Q9UHI5 535 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 MTF2Q9Y483 593 aaPredicted RBP13.08□□□□□ -0.32
COL18A1-201ENST00000342220 FRMPD3Q5JV73 1810 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 A0A096LPK6 155 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 LYNP07948 512 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 NDST2P52849 883 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 ADARP55265 1226 aaKnown RBP13.08□□□□□ -0.32
COL18A1-201ENST00000342220 TNK2Q07912 1038 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 CSHL1Q14406 222 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 GRM3Q14832 879 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 ARMC12Q5T9G4 340 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 FSTL4Q6MZW2 842 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 NEPROQ6NW34 567 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 CNSTQ6PJW8 725 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 GLT6D1Q7Z4J2 308 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 OR4K2Q8NGD2 314 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 ABHD8Q96I13 439 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 DHRS1Q96LJ7 313 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 KLF16Q9BXK1 252 aaPredicted RBP13.08□□□□□ -0.32
COL18A1-201ENST00000342220 VPS51Q9UID3 782 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 NEU3Q9UQ49 428 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 RAI2Q9Y5P3 530 aa13.08□□□□□ -0.32
COL18A1-201ENST00000342220 TM7SF2O76062 418 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 GSRP00390 522 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 PTPN2P17706 415 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 HOXD12P35452 270 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 IHHQ14623 411 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 GEN1Q17RS7 908 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 PARP15Q460N3 678 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 C1orf53Q5VUE5 145 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 GATA6Q92908 595 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 VPS39Q96JC1 886 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 FCRL5Q96RD9 977 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 UTP6Q9NYH9 597 aaKnown RBP13.07□□□□□ -0.32
COL18A1-201ENST00000342220 DNAJC16Q9Y2G8 782 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 NCF1BA6NI72 391 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-201ENST00000342220 NCF1CA8MVU1 366 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-201ENST00000342220 CIB2O75838 187 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 NCF1P14598 390 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-201ENST00000342220 SPRP35270 261 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-201ENST00000342220 GP5P40197 560 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 HPCAP84074 193 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 PCID2Q5JVF3 399 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 C1orf146Q5VVC0 180 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 SLC15A3Q8IY34 581 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 ASIC4Q96FT7 647 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 TUBGCP5Q96RT8 1024 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 TTC1Q99614 292 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 TTLL2Q9BWV7 592 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 PBX4Q9BYU1 374 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 TDP1Q9NUW8 608 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 MOCS1Q9NZB8 636 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 EMCNQ9ULC0 261 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 BIRC5O15392 142 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 NDUFB5O43674 189 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 USP1O94782 785 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 BAG2O95816 211 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 ANPEPP15144 967 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 CEBPBP17676 345 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 SERPINB9P50453 376 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 RING1Q06587 406 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 NSUN2Q08J23 767 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL18A1-201ENST00000342220 TCEA2Q15560 299 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 GRAMD4Q6IC98 578 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 PKN3Q6P5Z2 889 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 NET1Q7Z628 596 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-201ENST00000342220 POU5F2Q8N7G0 328 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 HJURPQ8NCD3 748 aaPredicted RBP13.07□□□□□ -0.32
COL18A1-201ENST00000342220 KCTD4Q8WVF5 259 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 IL12RB2Q99665 862 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 FEM1AQ9BSK4 669 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 INIPQ9NRY2 104 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 THAP1Q9NVV9 213 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 CIDEBQ9UHD4 219 aa13.07□□□□□ -0.32
COL18A1-201ENST00000342220 ANTXRLA6NF34 631 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 ZNF487B1APH4 448 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 XYLBO75191 536 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 UGT2B4P06133 528 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 SERPINA6P08185 405 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 ZDHHC11BP0C7U3 371 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 PAMP19021 973 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 IL10RBQ08334 325 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 ATG14Q6ZNE5 492 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 RPS27LQ71UM5 84 aaKnown RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 NCSTNQ92542 709 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 PLD4Q96BZ4 506 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 CATSPER2Q96P56 530 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 ZNF184Q99676 751 aaPredicted RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 CCDC68Q9H2F9 335 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 SNX15Q9NRS6 342 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 CD84Q9UIB8 345 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 RUVBL2Q9Y230 463 aaKnown RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 CCDC160A6NGH7 325 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 STX7O15400 261 aaKnown RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 PRAMEF11O60813 436 aa13.06□□□□□ -0.32
COL18A1-201ENST00000342220 ALDOAP04075 364 aaKnown RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 VARSP26640 1264 aaKnown RBP13.06□□□□□ -0.32
COL18A1-201ENST00000342220 HOXD9P28356 352 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms