RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 KCNE1P15382 129 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 PCSK6P29122 969 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ARHGDIAP52565 204 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 INHBCP55103 352 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 LIPEQ05469 1076 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 EPS8Q12929 822 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 LRP8Q14114 963 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 PLCL1Q15111 1095 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ZNF829Q3KNS6 432 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ZIK1Q3SY52 487 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 INTS11Q5TA45 600 aaKnown RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 KCTD8Q6ZWB6 473 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 TFAP2DQ7Z6R9 452 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 C8orf59Q8N0T1 100 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ITFG1Q8TB96 612 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 PCED1BQ96HM7 432 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 FEM1CQ96JP0 617 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 TSGA13Q96PP4 275 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 C1QTNF1Q9BXJ1 281 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 OSBPL2Q9H1P3 480 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 SLC25A51Q9H1U9 297 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 RAD21L1Q9H4I0 556 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ALG2Q9H553 416 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 FBRSL1Q9HCM7 1045 aaKnown RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 HMX1Q9NP08 348 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 SEMA4BQ9NPR2 832 aaPredicted RBP9.43□□□□□ -0.9
TRERF1-201ENST00000340840 ABCC13Q9NSE7 274 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 VPS9D1Q9Y2B5 631 aa9.43□□□□□ -0.9
TRERF1-201ENST00000340840 A0A0G2JLL6 359 aaPredicted RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SMIM35A0A1B0GVV1 85 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 MYBPHLA2RUH7 354 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 C9JVG2 144 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 PIP5K1BO14986 540 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SMIM10L2AP0DMW4 78 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SMIM10L2BP0DMW5 78 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 DPP6P42658 865 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 RABGGTBP53611 331 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 CCDC92Q53HC0 331 aaPredicted RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 RPS27LQ71UM5 84 aaKnown RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SPATA19Q7Z5L4 167 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 PRRT2Q7Z6L0 340 aaPredicted RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 FNDC5Q8NAU1 212 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 GOLM1Q8NBJ4 401 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 MYLPFQ96A32 169 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 TXNRD2Q9NNW7 524 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 HPS4Q9NQG7 708 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ARMC1Q9NVT9 282 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 TMEM9Q9P0T7 183 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 RNF11Q9Y3C5 154 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ZNF701M0R085 212 aaPredicted RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ARPC2O15144 300 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 BEST1O76090 585 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 C7P10643 843 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ATP6V1B2P21281 511 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 STT3AP46977 705 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ALDH3B2P48448 385 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 HERVK_113P63132 956 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ITGADQ13349 1161 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 TICAM1Q8IUC6 712 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 LRRC58Q96CX6 371 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SERPINB11Q96P15 392 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 GAD1Q99259 594 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 THUMPD3Q9BV44 507 aaKnown RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ERVK-6Q9BXR3 956 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 TRIM54Q9BYV2 358 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SMOXQ9NWM0 555 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 POLG2Q9UHN1 485 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 TRMT6Q9UJA5 497 aaKnown RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 CASTOR2A6NHX0 329 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 NCF1BA6NI72 391 aaPredicted RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 NCF1CA8MVU1 366 aaPredicted RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SOCS2O14508 198 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 VPS26AO75436 327 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 MMP3P08254 477 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 NCF1P14598 390 aaPredicted RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 CDH3P22223 829 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 GJA9P57773 515 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 FOXM1Q08050 763 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 PRKG2Q13237 762 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ZBTB6Q15916 424 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 GNASQ5JWF2 1037 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ZNF280DQ6N043 979 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 CTU1Q7Z7A3 348 aaKnown RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 ADCK1Q86TW2 530 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 PROSER1Q86XN7 944 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 FAM126BQ8IXS8 530 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 PDPRQ8NCN5 879 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 OR56A4Q8NGH8 313 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 UGT2B28Q9BY64 529 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SLC39A8Q9C0K1 460 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 HMG20AQ9NP66 347 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 TMEM181Q9P2C4 612 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 DAPK2Q9UIK4 370 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 GOLGB1Q14789 3259 aaKnown RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 DOCK5Q9H7D0 1870 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SLC22A3O75751 556 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 HLA-DQB2P05538 268 aa9.42□□□□□ -0.9
TRERF1-201ENST00000340840 HOXA11P31270 313 aaPredicted RBP9.42□□□□□ -0.9
TRERF1-201ENST00000340840 SLC26A3P40879 764 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms