RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 LCA5Q86VQ0 697 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 FAM45AQ8TCE6 357 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 GDPD5Q8WTR4 605 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 SORCS1Q8WY21 1168 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 VOPP1Q96AW1 172 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 UBXN10Q96LJ8 280 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 MRPL46Q9H2W6 279 aaKnown RBP22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 TBC1D14Q9P2M4 693 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 HS3ST2Q9Y278 367 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 XIRP2A4UGR9 3374 aa22.4■■□□□ 1.18
PDLIM2-203ENST00000339162 OR1I1O60431 355 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 CBX6O95503 412 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 HSPA4LO95757 839 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 CHRNGP07510 517 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 LTA4HP09960 611 aaKnown RBP22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 TMEM215Q68D42 235 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 C22orf39Q6P5X5 142 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 KIF2BQ8N4N8 673 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 ZNF781Q8N8C0 355 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 RDH11Q8TC12 318 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 SKA1Q96BD8 255 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 RSPRY1Q96DX4 576 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 ATP13A3Q9H7F0 1226 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 IL17CQ9P0M4 197 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 FAM50BQ9Y247 325 aa22.39■■□□□ 1.18
PDLIM2-203ENST00000339162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 HTRA2O43464 458 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 NDUFS3O75489 264 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 FDXRP22570 491 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 LIPMQ5VYY2 423 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 ADIPOR2Q86V24 386 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 VN1R2Q8NFZ6 395 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 LPGAT1Q92604 370 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 MRPL57Q9BQC6 102 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 SHCBP1LQ9BZQ2 653 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 RASSF4Q9H2L5 321 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 MAGEE1Q9HCI5 957 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 HACD3Q9P035 362 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 HAO1Q9UJM8 370 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 MID2Q9UJV3 735 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 PKP3Q9Y446 797 aa22.39■■□□□ 1.17
PDLIM2-203ENST00000339162 A0A0J9YYE9 177 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 C1orf232A0A0U1RR37 186 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 GOLGA8CPA6NN73 597 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 TRBC1P01850 177 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 HNF1BP35680 557 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 SNRPD1P62314 119 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 AGAP9Q5VTM2 703 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 PDE12Q6L8Q7 609 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 MAVSQ7Z434 540 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 WDR75Q8IWA0 830 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 SREK1Q8WXA9 508 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 SCG3Q8WXD2 468 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 TMEM237Q96Q45 408 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 AARSD1Q9BTE6 412 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 DPP7Q9UHL4 492 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 SLC25A13Q9UJS0 675 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 UNC80Q8N2C7 3258 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 CLDN7O95471 211 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 PSMA3P25788 255 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 HMGCLP35914 325 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 CSNK1DP48730 415 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 ECT2LQ008S8 904 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 MYLK3Q32MK0 819 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 TCEAL5Q5H9L2 206 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 TECRLQ5HYJ1 363 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 VWA5B1Q5TIE3 1220 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 DPY19L3Q6ZPD9 716 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 Q6ZVU0 165 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 TAS2R42Q7RTR8 314 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 TXNDC5Q8NBS9 432 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 CYB5D2Q8WUJ1 264 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 NAT14Q8WUY8 206 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 RILPQ96NA2 401 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 NMUR2Q9GZQ4 415 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 ZDHHC6Q9H6R6 413 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 CYP4F12Q9HCS2 524 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 ARMCX1Q9P291 453 aa22.38■■□□□ 1.17
PDLIM2-203ENST00000339162 DNAJC8O75937 253 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 SRP72O76094 671 aaKnown RBP22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 UNC5CO95185 931 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 WISP3O95389 354 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 T-ENOLP0DO92 83 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 KCNA5P22460 613 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 SERPINA4P29622 427 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 CCNHP51946 323 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 GEN1Q17RS7 908 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 ELMSAN1Q6PJG2 1045 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 METTL3Q86U44 580 aaKnown RBP22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 CCNYL1Q8N7R7 359 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 PBX4Q9BYU1 374 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 ALG9Q9H6U8 611 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 ZFYVE1Q9HBF4 777 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 INTS10Q9NVR2 710 aaKnown RBP22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 TFEBP19484 476 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 MAPK8P45983 427 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 KCNC1P48547 511 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 XIAPP98170 497 aa22.37■■□□□ 1.17
PDLIM2-203ENST00000339162 PTPRNQ16849 979 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms