RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ZNF697Q5TEC3 545 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 ASTLQ6HA08 431 aaPredicted RBP16.23■□□□□ 0.19
HPS1-202ENST00000338546 ZNF549Q6P9A3 640 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 RBM23Q86U06 439 aaKnown RBP16.23■□□□□ 0.19
HPS1-202ENST00000338546 ADIPOR2Q86V24 386 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 WFIKKN2Q8TEU8 576 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 OSCP1Q8WVF1 389 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 STON2Q8WXE9 905 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 PPM1EQ8WY54 764 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.23■□□□□ 0.19
HPS1-202ENST00000338546 SORT1Q99523 831 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 C20orf27Q9GZN8 174 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 DRC3Q9H069 523 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 MYLK2Q9H1R3 596 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 CCDC68Q9H2F9 335 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 ZFYVE1Q9HBF4 777 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 XPR1Q9UBH6 696 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 HAO1Q9UJM8 370 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 APPL1Q9UKG1 709 aa16.23■□□□□ 0.19
HPS1-202ENST00000338546 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.23■□□□□ 0.19
HPS1-202ENST00000338546 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.22■□□□□ 0.19
HPS1-202ENST00000338546 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.22■□□□□ 0.19
HPS1-202ENST00000338546 CFAP73A6NFT4 308 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.22■□□□□ 0.19
HPS1-202ENST00000338546 ANKRD65E5RJM6 399 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 TK2O00142 265 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 HOXC11O43248 304 aaPredicted RBP16.22■□□□□ 0.19
HPS1-202ENST00000338546 ADH1CP00326 375 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 ASLP04424 464 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 POLR2EP19388 210 aaKnown RBP16.22■□□□□ 0.19
HPS1-202ENST00000338546 GMPRP36959 345 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 PTGER3P43115 390 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 CTSOP43234 321 aaPredicted RBP16.22■□□□□ 0.19
HPS1-202ENST00000338546 CDKN2DP55273 166 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 PEX6Q13608 980 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 ZNF460Q14592 562 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 TECRLQ5HYJ1 363 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 LYPLAL1Q5VWZ2 237 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 ADGRD2Q7Z7M1 963 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 LDB1Q86U70 411 aaPredicted RBP16.22■□□□□ 0.19
HPS1-202ENST00000338546 ITFG1Q8TB96 612 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 PPP2R3CQ969Q6 453 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 SKA1Q96BD8 255 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 ERP27Q96DN0 273 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 TTC1Q99614 292 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 GATA5Q9BWX5 397 aaPredicted RBP16.22■□□□□ 0.19
HPS1-202ENST00000338546 SUV39H2Q9H5I1 410 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 TAS2R13Q9NYV9 303 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 CPSF2Q9P2I0 782 aaKnown RBP16.22■□□□□ 0.19
HPS1-202ENST00000338546 HEY2Q9UBP5 337 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 FKBPLQ9UIM3 349 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 MSRAQ9UJ68 235 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 ZFP69BQ9UJL9 534 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 SORCS3Q9UPU3 1222 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 DNAJC16Q9Y2G8 782 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 CRYL1Q9Y2S2 319 aa16.22■□□□□ 0.19
HPS1-202ENST00000338546 GOLGA8CPA6NN73 597 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 F8W8V4 182 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 ITM2AO43736 263 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 NPHS1O60500 1241 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 CCDC22O60826 627 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 UNC5CO95185 931 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 PYGLP06737 847 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 CCDC166P0CW27 439 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 NNMTP40261 264 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 POLR2LP62875 67 aaKnown RBP16.21■□□□□ 0.19
HPS1-202ENST00000338546 XIAPP98170 497 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 PFKPQ01813 784 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 CSHL1Q14406 222 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 DHCR24Q15392 516 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 CDKN3Q16667 212 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 SPRED3Q2MJR0 410 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 MTDHQ86UE4 582 aaKnown RBP16.21■□□□□ 0.19
HPS1-202ENST00000338546 SLC22A9Q8IVM8 553 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 KIRREL3Q8IZU9 778 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 RYBPQ8N488 228 aaPredicted RBP16.21■□□□□ 0.19
HPS1-202ENST00000338546 RHEBL1Q8TAI7 183 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 SCRN2Q96FV2 425 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 RPL10LQ96L21 214 aaKnown RBP16.21■□□□□ 0.19
HPS1-202ENST00000338546 TNKS2Q9H2K2 1166 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 DNAJC28Q9NX36 388 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 DUS2Q9NX74 493 aaKnown RBP16.21■□□□□ 0.19
HPS1-202ENST00000338546 GDE1Q9NZC3 331 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 SLC8A2Q9UPR5 921 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 SLC27A6Q9Y2P4 619 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 WNT6Q9Y6F9 365 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 SLC30A1Q9Y6M5 507 aa16.21■□□□□ 0.19
HPS1-202ENST00000338546 SLCO1B7G3V0H7 640 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 DLX3O60479 287 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 PIGNO95427 931 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 HSPA4LO95757 839 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 ESR1P03372 595 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 SRPRAP08240 638 aaKnown RBP16.21■□□□□ 0.18
HPS1-202ENST00000338546 GLRBP48167 497 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 NRIP1P48552 1158 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 STK19P49842 368 aaPredicted RBP16.21■□□□□ 0.18
HPS1-202ENST00000338546 LIG3P49916 1009 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 RASSF2P50749 326 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 AQP5P55064 265 aa16.21■□□□□ 0.18
HPS1-202ENST00000338546 ZBTB16Q05516 673 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms