RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 HMGXB4Q9UGU5 601 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 PRELID1Q9Y255 219 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 ASMTP46597 345 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 CEBPGP53567 150 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 INHBEP58166 350 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 MCCD1P59942 119 aaPredicted RBP13.09□□□□□ -0.31
HLCS-201ENST00000336648 CES5AQ6NT32 575 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.09□□□□□ -0.31
HLCS-201ENST00000336648 MINDY2Q8NBR6 621 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 COPS8Q99627 209 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 RHBGQ9H310 441 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 SAGE2PA6NJ88 616 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 SLC35G4P0C7Q5 338 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 DRD4P21917 467 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 MATKP42679 507 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 ARFIP1P53367 373 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 PFKPQ01813 784 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 OR8H1Q8NGG4 311 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 HM13Q8TCT9 377 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 SEMA3CQ99985 751 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 RHOBTB2Q9BYZ6 727 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 PMF1-BGLAPU3KQ54 211 aa13.09□□□□□ -0.31
HLCS-201ENST00000336648 OR6C75A6NL08 312 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 LSM3P62310 102 aaKnown RBP13.08□□□□□ -0.31
HLCS-201ENST00000336648 PPP3CAQ08209 521 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 WSCD1Q658N2 575 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 TMC8Q8IU68 726 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 KCTD4Q8WVF5 259 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 COL26A1Q96A83 441 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 GAD1Q99259 594 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 MTFR1LQ9H019 292 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 RHOJQ9H4E5 214 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 BRD9Q9H8M2 597 aa13.08□□□□□ -0.31
HLCS-201ENST00000336648 MOV10Q9HCE1 1003 aaKnown RBP13.08□□□□□ -0.31
HLCS-201ENST00000336648 H3BNX3 289 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 MPZL2O60487 215 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 NDUFS2O75306 463 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 PSMD10O75832 226 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 MARSP56192 900 aaKnown RBP13.08□□□□□ -0.32
HLCS-201ENST00000336648 MYBPC1Q00872 1141 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 USP41Q3LFD5 358 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 GPR107Q5VW38 600 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 PTCHD4Q6ZW05 846 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 VSIG10LQ86VR7 867 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 SLC9A6Q92581 669 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 AP1S3Q96PC3 154 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 OR52E6Q96RD3 313 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 AIFM2Q9BRQ8 373 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 MAF1Q9H063 256 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 SQORQ9Y6N5 450 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 G3V2T6 193 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 HNRNPH3P31942 346 aaKnown RBP13.08□□□□□ -0.32
HLCS-201ENST00000336648 PPM1AP35813 382 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 MRPS6P82932 125 aaKnown RBP13.08□□□□□ -0.32
HLCS-201ENST00000336648 RIPK1Q13546 671 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 GRB14Q14449 540 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 BMT2Q1RMZ1 405 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 CDYL2Q8N8U2 506 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 BTBD9Q96Q07 612 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 PCDH12Q9NPG4 1184 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 TIMMDC1Q9NPL8 285 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 SNX15Q9NRS6 342 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.08□□□□□ -0.32
HLCS-201ENST00000336648 VWA7Q9Y334 891 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 ZSCAN5DPP0CG00 497 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 THRBP10828 461 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 VEGFAP15692 232 aaPredicted RBP13.08□□□□□ -0.32
HLCS-201ENST00000336648 GLRA2P23416 452 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 FOLH1Q04609 750 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 DCLRE1AQ6PJP8 1040 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 PRDM12Q9H4Q4 367 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 CKLFQ9UBR5 152 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 PSMD13Q9UNM6 376 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 AP4B1Q9Y6B7 739 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 PNLIPRP1P54315 467 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 C15orf59Q2T9L4 293 aaPredicted RBP13.08□□□□□ -0.32
HLCS-201ENST00000336648 PIGZQ86VD9 579 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 SRFBP1Q8NEF9 429 aaKnown RBP13.08□□□□□ -0.32
HLCS-201ENST00000336648 NUP50Q9UKX7 468 aa13.08□□□□□ -0.32
HLCS-201ENST00000336648 MCIDASD6RGH6 385 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 EML1O00423 815 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 DHX15O43143 795 aaKnown RBP13.07□□□□□ -0.32
HLCS-201ENST00000336648 SASH3O75995 380 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 HDCP19113 662 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 TPSB2P20231 275 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 HSD3B2P26439 372 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 TPSAB1Q15661 275 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 C4orf46Q504U0 113 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 C12orf56Q8IXR9 622 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 ZBTB45Q96K62 511 aaPredicted RBP13.07□□□□□ -0.32
HLCS-201ENST00000336648 LHX5Q9H2C1 402 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 RASSF1Q9NS23 344 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 IFT80Q9P2H3 777 aaPredicted RBP13.07□□□□□ -0.32
HLCS-201ENST00000336648 XPR1Q9UBH6 696 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 AGO1Q9UL18 857 aaKnown RBP13.07□□□□□ -0.32
HLCS-201ENST00000336648 SNX7Q9UNH6 387 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 CSDE1O75534 798 aaKnown RBP13.07□□□□□ -0.32
HLCS-201ENST00000336648 RLN1P04808 185 aa13.07□□□□□ -0.32
HLCS-201ENST00000336648 AP1S1P61966 158 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms