RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 DGKKQ5KSL6 1271 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 FAM109BQ6ICB4 259 aaPredicted RBP13.48□□□□□ -0.25
LMO1-201ENST00000335790 ATG14Q6ZNE5 492 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 ARID3BQ8IVW6 561 aaPredicted RBP13.48□□□□□ -0.25
LMO1-201ENST00000335790 WDR75Q8IWA0 830 aaKnown RBP13.48□□□□□ -0.25
LMO1-201ENST00000335790 CBARPQ8N350 705 aaPredicted RBP13.48□□□□□ -0.25
LMO1-201ENST00000335790 GRIN3AQ8TCU5 1115 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 PDCD6IPQ8WUM4 868 aaKnown RBP13.48□□□□□ -0.25
LMO1-201ENST00000335790 HEXDCQ8WVB3 486 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 ERP27Q96DN0 273 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 CCDC126Q96EE4 140 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 NDNQ99608 321 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 GATA5Q9BWX5 397 aaPredicted RBP13.48□□□□□ -0.25
LMO1-201ENST00000335790 DRC3Q9H069 523 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 ZMYND15Q9H091 742 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 ATP13A3Q9H7F0 1226 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 XPR1Q9UBH6 696 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 RAPGEFL1Q9UHV5 662 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 EVLQ9UI08 416 aaPredicted RBP13.48□□□□□ -0.25
LMO1-201ENST00000335790 DCTN4Q9UJW0 460 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 PCDHB9Q9Y5E1 797 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 COMMD10Q9Y6G5 202 aa13.48□□□□□ -0.25
LMO1-201ENST00000335790 A0A0G2JND7 137 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 ZNF195O14628 629 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 STX7O15400 261 aaKnown RBP13.47□□□□□ -0.25
LMO1-201ENST00000335790 DLX3O60479 287 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 NPHS1O60500 1241 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 HNRNPCL1O60812 293 aaKnown RBP13.47□□□□□ -0.25
LMO1-201ENST00000335790 UNC5CO95185 931 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 TYRP14679 529 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 SAT1P21673 171 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 ATP5F1P24539 256 aaPredicted RBP13.47□□□□□ -0.25
LMO1-201ENST00000335790 ABL2P42684 1182 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 TTPAP49638 278 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 LIG3P49916 1009 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 PEX6Q13608 980 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 KRT72Q14CN4 511 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 LY6G5CQ5SRR4 150 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 C22orf39Q6P5X5 142 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 NAPRTQ6XQN6 538 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 ASRGL1Q7L266 308 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 CLNKQ7Z7G1 428 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 ADGRD2Q7Z7M1 963 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 LDB1Q86U70 411 aaPredicted RBP13.47□□□□□ -0.25
LMO1-201ENST00000335790 CAMK1DQ8IU85 385 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 CELF5Q8N6W0 485 aaKnown RBP13.47□□□□□ -0.25
LMO1-201ENST00000335790 PPP4R1Q8TF05 950 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 PPM1EQ8WY54 764 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 MYLIPQ8WY64 445 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 BHMTQ93088 406 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 EID2BQ96D98 161 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 SMIM14Q96QK8 99 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 BBS2Q9BXC9 721 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 TM6SF2Q9BZW4 377 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 LINC00597Q9H2U6 94 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 GPAMQ9HCL2 828 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 TXLNGQ9NUQ3 528 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 POLR3BQ9NW08 1133 aaPredicted RBP13.47□□□□□ -0.25
LMO1-201ENST00000335790 DNAJC28Q9NX36 388 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 HEY2Q9UBP5 337 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 SLC25A13Q9UJS0 675 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 DNAJC16Q9Y2G8 782 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.47□□□□□ -0.25
LMO1-201ENST00000335790 YBX2Q9Y2T7 364 aaKnown RBP13.47□□□□□ -0.25
LMO1-201ENST00000335790 NUMBLQ9Y6R0 609 aa13.47□□□□□ -0.25
LMO1-201ENST00000335790 CAPN8A6NHC0 703 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 PFDN6O15212 129 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 LYPLA1O75608 230 aaPredicted RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 T-ENOLP0DO92 83 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 SERPINB3P29508 390 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 SERPINA4P29622 427 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 MC4RP32245 332 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 CTSOP43234 321 aaPredicted RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 PGGT1BP53609 377 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 EPHB1P54762 984 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 TUBB3Q13509 450 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 RCN2Q14257 317 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 SHHQ15465 462 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 MYLK3Q32MK0 819 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 CARD16Q5EG05 197 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 AARS2Q5JTZ9 985 aaKnown RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 KLC3Q6P597 504 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 TMEM207Q6UWW9 146 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 CERS6Q6ZMG9 384 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 MTDHQ86UE4 582 aaKnown RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 ADIPOR2Q86V24 386 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 RHEBL1Q8TAI7 183 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 ANKRD49Q8WVL7 239 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 SMG7Q92540 1137 aaKnown RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 INPP5DQ92835 1189 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 SCYL1Q96KG9 808 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 ZNF641Q96N77 438 aaPredicted RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 MCCC1Q96RQ3 725 aaPredicted RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 CDCA3Q99618 268 aaPredicted RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 ECT2Q9H8V3 914 aa13.46□□□□□ -0.25
LMO1-201ENST00000335790 CPSF2Q9P2I0 782 aaKnown RBP13.46□□□□□ -0.25
LMO1-201ENST00000335790 FKBPLQ9UIM3 349 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms