RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 SLC2A6Q9UGQ3 507 aa17.48■□□□□ 0.39
CHGA-202ENST00000334654 RIMKLBQ9ULI2 386 aa17.48■□□□□ 0.39
CHGA-202ENST00000334654 SOX13Q9UN79 622 aa17.48■□□□□ 0.39
CHGA-202ENST00000334654 GOLGA8CPA6NN73 597 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 C2orf81A6NN90 581 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 RPP40O75818 363 aaKnown RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 TM7SF2O76062 418 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 PAK4O96013 591 aaPredicted RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 SLC4A1P02730 911 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 BPIP17213 487 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 MAT2AP31153 395 aaKnown RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 RPL6Q02878 288 aaKnown RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 ACVR1Q04771 509 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 SEPT6Q14141 434 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 TSTD2Q5T7W7 516 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 ARMC3Q5W041 872 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 CCNI2Q6ZMN8 369 aaPredicted RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 CYP2U1Q7Z449 544 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 PELI3Q8N2H9 469 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 DEFB119Q8N690 84 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 EIF1ADQ8N9N8 165 aaKnown RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 GPR26Q8NDV2 337 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 OR13J1Q8NGT2 312 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 RUBCNQ92622 972 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 DTD2Q96FN9 168 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 DNAJC1Q96KC8 554 aaKnown RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 KLF6Q99612 283 aaPredicted RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 EBNA1BP2Q99848 306 aaKnown RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 C19orf43Q9BQ61 176 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 FOXP3Q9BZS1 431 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 PHACTR1Q9C0D0 580 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 DUSP15Q9H1R2 295 aaPredicted RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 MRM3Q9HC36 420 aaKnown RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 TREX1Q9NSU2 369 aa17.47■□□□□ 0.39
CHGA-202ENST00000334654 NLE1Q9NVX2 485 aaPredicted RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.47■□□□□ 0.39
CHGA-202ENST00000334654 TNRC6BQ9UPQ9 1833 aaKnown RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 CCDC78A2IDD5 438 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 GAPDHSO14556 408 aaPredicted RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 WNT9AO14904 365 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 RAD51BO15315 384 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 EIF3HO15372 352 aaKnown RBP eCLIP17.46■□□□□ 0.39
CHGA-202ENST00000334654 NDUFS2O75306 463 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 NMBRP28336 390 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 ELK3P41970 407 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 ARSDP51689 593 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 VSNL1P62760 191 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 PDIA2Q13087 525 aaKnown RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 HLTFQ14527 1009 aaKnown RBP eCLIP17.46■□□□□ 0.39
CHGA-202ENST00000334654 ACOX1Q15067 660 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 DNAJC21Q5F1R6 531 aaKnown RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 HP1BP3Q5SSJ5 553 aaPredicted RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 ESRP1Q6NXG1 681 aaKnown RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 CES3Q6UWW8 571 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 TMEM135Q86UB9 458 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 TMEFF1Q8IYR6 380 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 PPHLN1Q8NEY8 458 aaKnown RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 STYXQ8WUJ0 223 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 PTCD2Q8WV60 388 aaKnown RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 CENPTQ96BT3 561 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 LRRC39Q96DD0 335 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 MFSD3Q96ES6 412 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 FCRL3Q96P31 734 aaPredicted RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 ABCG8Q9H221 673 aa17.46■□□□□ 0.39
CHGA-202ENST00000334654 NFKBIL1Q9UBC1 381 aaPredicted RBP17.46■□□□□ 0.39
CHGA-202ENST00000334654 FAM237BA0A1B0GVD1 139 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 MAGEB16A2A368 324 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 RGSL1A5PLK6 1076 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 CCL22O00626 93 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 STX7O15400 261 aaKnown RBP17.45■□□□□ 0.38
CHGA-202ENST00000334654 LZTS3O60299 673 aaPredicted RBP17.45■□□□□ 0.38
CHGA-202ENST00000334654 FSBPO95073 299 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 FAM153BP0C7A2 387 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 CNR2P34972 360 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 XIAPP98170 497 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 PDE1BQ01064 536 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 WSCD2Q2TBF2 565 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 FAM153CQ494X1 144 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 PLK5Q496M5 336 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 WDR93Q6P2C0 686 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 CENPUQ71F23 418 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 NRSN1Q8IZ57 195 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 GPR161Q8N6U8 529 aaKnown RBP17.45■□□□□ 0.38
CHGA-202ENST00000334654 TP53I13Q8NBR0 393 aaPredicted RBP17.45■□□□□ 0.38
CHGA-202ENST00000334654 PEX13Q92968 403 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 SCAMP4Q969E2 229 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 STAMBPL1Q96FJ0 436 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 FMO2Q99518 471 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 IL26Q9NPH9 171 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 MBNL1Q9NR56 388 aaKnown RBP17.45■□□□□ 0.38
CHGA-202ENST00000334654 PKD2L2Q9NZM6 624 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 CD84Q9UIB8 345 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 PCDHGA2Q9Y5H1 932 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 SLCO1B1Q9Y6L6 691 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 PLXNB3Q9ULL4 1909 aa17.45■□□□□ 0.38
CHGA-202ENST00000334654 ZCWPW2A0A1B0GU75 182 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 H7C0S8 307 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 SLC31A1O15431 190 aa17.44■□□□□ 0.38
CHGA-202ENST00000334654 MAP3K13O43283 966 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms