RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PTGDR2Q9Y5Y4 395 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 MRPL42Q9Y6G3 142 aaKnown RBP13.74□□□□□ -0.21
SYNE3-201ENST00000334258 SLC30A1Q9Y6M5 507 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 A0A087X1B8 175 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 DYNC1LI2O43237 492 aaPredicted RBP13.74□□□□□ -0.21
SYNE3-201ENST00000334258 HUS1O60921 280 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 FCGR1AP12314 374 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 POLR2IP36954 125 aaKnown RBP13.74□□□□□ -0.21
SYNE3-201ENST00000334258 HLCSP50747 726 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 BTBD8Q5XKL5 378 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 ARHGAP17Q68EM7 881 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 LINC00523Q86TU6 105 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 ADGRG5Q8IZF4 528 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 CLEC4FQ8N1N0 589 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 HPS1Q92902 700 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 WNT8BQ93098 351 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 HSFY1Q96LI6 401 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 RNF145Q96MT1 663 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 AKTIPQ9H8T0 292 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 MAP10Q9P2G4 905 aa13.74□□□□□ -0.21
SYNE3-201ENST00000334258 DFFAO00273 331 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 CLDN5O00501 218 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 NCAM2O15394 837 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 DNAJB13P59910 316 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 BNIP2Q12982 314 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 BROXQ5VW32 411 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 SLC43A3Q8NBI5 491 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 GPRC5AQ8NFJ5 357 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 SNX19Q92543 992 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 TUBGCP3Q96CW5 907 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 FEM1CQ96JP0 617 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 MYRFLQ96LU7 910 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 C3orf30Q96M34 536 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 MCMBPQ9BTE3 642 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 FICDQ9BVA6 458 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 SMARCAD1Q9H4L7 1026 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 ALG9Q9H6U8 611 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 ACTR3BQ9P1U1 418 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 ANAPC2Q9UJX6 822 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 FAM32AQ9Y421 112 aaKnown RBP13.73□□□□□ -0.21
SYNE3-201ENST00000334258 IQCA1LA6NCM1 817 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 SYNCRIPO60506 623 aaKnown RBP13.73□□□□□ -0.21
SYNE3-201ENST00000334258 INSRRP14616 1297 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 TMBIM6P55061 237 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 CAMK2BQ13554 666 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 NFYCQ13952 458 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 HACD2Q6Y1H2 254 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 HFE2Q6ZVN8 426 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 UNC93AQ86WB7 457 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 COLGALT2Q8IYK4 626 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 MIER2Q8N344 545 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 RNF34Q969K3 372 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 ITPKCQ96DU7 683 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 TEKT5Q96M29 485 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 FAM49AQ9H0Q0 323 aaPredicted RBP13.73□□□□□ -0.21
SYNE3-201ENST00000334258 RIC8BQ9NVN3 520 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 CMTM6Q9NX76 183 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 SNTG2Q9NY99 539 aa13.73□□□□□ -0.21
SYNE3-201ENST00000334258 TOR1BO14657 336 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 RSL1D1O76021 490 aaKnown RBP13.72□□□□□ -0.21
SYNE3-201ENST00000334258 ALDOCP09972 364 aaKnown RBP13.72□□□□□ -0.21
SYNE3-201ENST00000334258 RABGGTBP53611 331 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 RABL3Q5HYI8 236 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 NEPROQ6NW34 567 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 PRMT9Q6P2P2 845 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 ZNF773Q6PK81 442 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 PEX5LQ8IYB4 626 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 OR13F1Q8NGS4 319 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 RAB2BQ8WUD1 216 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 MS4A4AQ96JQ5 239 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 KCTD14Q9BQ13 255 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-201ENST00000334258 MED10Q9BTT4 135 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 FSD1LQ9BXM9 530 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 CCDC90BQ9GZT6 254 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 PLEKHA5Q9HAU0 1116 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 SACM1LQ9NTJ5 587 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 DDIT4Q9NX09 232 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 KCNH4Q9UQ05 1017 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 NUP205Q92621 2012 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 EVPLQ92817 2033 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 AP3B1O00203 1094 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 ACOX3O15254 700 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 RBP1P09455 135 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 LTA4HP09960 611 aaKnown RBP13.72□□□□□ -0.21
SYNE3-201ENST00000334258 GFAPP14136 432 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 PAMP19021 973 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 CAPN3P20807 821 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 OPRL1P41146 370 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 PCYT1AP49585 367 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 PLPPR4Q7Z2D5 763 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 SNX29P2Q8IUI4 249 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 SCAIQ8N9R8 606 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 LHPPQ9H008 270 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 SLC27A5Q9Y2P5 690 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 ALDH2P05091 517 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 MBL2P11226 248 aaPredicted RBP13.72□□□□□ -0.21
SYNE3-201ENST00000334258 CES1P23141 567 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 RFC2P35250 354 aa13.72□□□□□ -0.21
SYNE3-201ENST00000334258 YBX1P67809 324 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms