RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 SGK2Q9HBY8 427 aa10.18□□□□□ -0.78
CHD3-201ENST00000330494 STK39Q9UEW8 545 aa10.18□□□□□ -0.78
CHD3-201ENST00000330494 OR10H1Q9Y4A9 318 aa10.18□□□□□ -0.78
CHD3-201ENST00000330494 LOC100506127A0A0U1RQW1 187 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 MAP2K7O14733 419 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 HCRTO43612 131 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 LCA5LO95447 670 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 FGF1P05230 155 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 TCEA1P23193 301 aaKnown RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 HTR1BP28222 390 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 TNFRSF8P28908 595 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ELF3P78545 371 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 ARMCX4Q5H9R4 360 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 CLEC6AQ6EIG7 209 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 POMZP3Q6PJE2 187 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 NAPRTQ6XQN6 538 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 RBFAQ8N0V3 343 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 IPCEF1Q8WWN9 437 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 ZNF516Q92618 1163 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 MFSD3Q96ES6 412 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 DNAJC1Q96KC8 554 aaKnown RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 OR52E6Q96RD3 313 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 OSBPL6Q9BZF3 934 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ZNF232Q9UNY5 417 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 C15orf41Q9Y2V0 281 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 IGKV6D-41A0A0C4DH26 115 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 PIPSLA2A3N6 862 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 FOSL2P15408 326 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 CBX2Q14781 532 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 ADRM1Q16186 407 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 VWA5B1Q5TIE3 1220 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 LYPLAL1Q5VWZ2 237 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 GDF6Q6KF10 455 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 SLAIN1Q8ND83 568 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 PPP1R14BQ96C90 147 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 TBATAQ96M53 351 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 OGDHLQ9ULD0 1010 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 GLYATL1P3A0A0U1RQE8 302 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 LRIG2O94898 1065 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 NELFEP18615 380 aaKnown RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 TLX1P31314 330 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 PDK4Q16654 411 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 PANX1Q96RD7 426 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ZNF214Q9UL59 606 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 ZNF490Q9ULM2 529 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 U3KQV3 271 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 MYH3P11055 1940 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 PSMG1O95456 288 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 VNN1O95497 513 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 MYL12AP19105 171 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ICAM3P32942 547 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ATP12AP54707 1039 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ZNF549Q6P9A3 640 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ZNF605Q86T29 641 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ZNF567Q8N184 647 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 DHRSXQ8N5I4 330 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 NELL1Q92832 810 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 TBC1D10AQ9BXI6 508 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 CPQQ9Y646 472 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 CITO14578 2027 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 KRT36O76013 467 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 OR6B1O95007 311 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 MPPE1Q53F39 396 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 KHDRBS2Q5VWX1 349 aaKnown RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 ZBTB46Q86UZ6 589 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 IFNL1Q8IU54 200 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 NPAS4Q8IUM7 802 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 KLHL23Q8NBE8 558 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ZNF398Q8TD17 642 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 BRI3BPQ8WY22 251 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 GBA3Q9H227 469 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 MTF2Q9Y483 593 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 CHD4Q14839 1912 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 YJEFN3A6XGL0 299 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 SLC28A1O00337 649 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ACSL4O60488 711 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ENTPD5O75356 428 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 APODP05090 189 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 BUD31P41223 144 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 IL12RB1P42701 662 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 LSM3P62310 102 aaKnown RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 PEX6Q13608 980 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 C19orf18Q8NEA5 215 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 RMND5BQ96G75 393 aaPredicted RBP10.17□□□□□ -0.78
CHD3-201ENST00000330494 APOL4Q9BPW4 351 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 ATG10Q9H0Y0 220 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 XPNPEP1Q9NQW7 623 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 SLC17A6Q9P2U8 582 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 DEC1Q9P2X7 70 aa10.17□□□□□ -0.78
CHD3-201ENST00000330494 XRN1Q8IZH2 1706 aaKnown RBP10.16□□□□□ -0.78
CHD3-201ENST00000330494 A0A088AWK7 358 aa10.16□□□□□ -0.78
CHD3-201ENST00000330494 RGSL1A5PLK6 1076 aa10.16□□□□□ -0.78
CHD3-201ENST00000330494 SLC38A8A6NNN8 435 aa10.16□□□□□ -0.78
CHD3-201ENST00000330494 AZIN1O14977 448 aa10.16□□□□□ -0.78
CHD3-201ENST00000330494 ZNF10P21506 573 aaPredicted RBP10.16□□□□□ -0.78
CHD3-201ENST00000330494 PIK3R1P27986 724 aa10.16□□□□□ -0.78
CHD3-201ENST00000330494 BIKQ13323 160 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms