RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ZNF98A6NK75 572 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 I3L521 148 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 NFKBIEO00221 500 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 NEMP1O14524 444 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 TPST1O60507 370 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CALB1P05937 261 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CYP2C8P10632 490 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CYP3A5P20815 502 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CRHR1P34998 444 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 RPL22P35268 128 aaKnown RBP11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CXCL9Q07325 125 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CYP24A1Q07973 514 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 INCA1Q0VD86 236 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 ATP13A4Q4VNC1 1196 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 GRTP1Q5TC63 336 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 EPGNQ6UW88 154 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 C15orf39Q6ZRI6 1047 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 VN1R5Q7Z5H4 357 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 HORMAD1Q86X24 394 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 RIOX2Q8IUF8 465 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 MAP4K3Q8IVH8 894 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CARNMT1Q8N4J0 409 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 PACRGLQ8N7B6 248 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 NIPA2Q8N8Q9 360 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 ZBTB44Q8NCP5 570 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 RP9Q8TA86 221 aaKnown RBP11.86□□□□□ -0.51
SHMT2-201ENST00000328923 PHF10Q8WUB8 498 aaKnown RBP11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CANT1Q8WVQ1 401 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 OPALINQ96PE5 141 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 APBA2Q99767 749 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 BEX2Q9BXY8 128 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 RANGRFQ9HD47 186 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-201ENST00000328923 CD320Q9NPF0 282 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 BRD7Q9NPI1 651 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 BAG5Q9UL15 447 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 TEX264Q9Y6I9 313 aa11.86□□□□□ -0.51
SHMT2-201ENST00000328923 YKT6O15498 198 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 PAPSS1O43252 624 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-201ENST00000328923 DNAJB5O75953 348 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 CDK14O94921 469 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 INMTO95050 263 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 LYPLA2O95372 231 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 RETP07949 1114 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 OSBPP22059 807 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 BLVRAP53004 296 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 GDF10P55107 478 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 SNAP25P60880 206 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 INTS11Q5TA45 600 aaKnown RBP11.85□□□□□ -0.51
SHMT2-201ENST00000328923 MROH9Q5TGP6 573 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 FKBP1CQ5VVH2 108 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 GARNL3Q5VVW2 1013 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 TMPRSS9Q7Z410 1059 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 C10orf107Q8IVU9 208 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 ANKRD13AQ8IZ07 590 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 URGCPQ8TCY9 931 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 NECTIN4Q96NY8 510 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 REXO4Q9GZR2 422 aaKnown RBP11.85□□□□□ -0.51
SHMT2-201ENST00000328923 TMEM39BQ9GZU3 492 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 WDR55Q9H6Y2 383 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-201ENST00000328923 FBXO28Q9NVF7 368 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 TMLHEQ9NVH6 421 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 TAS2R7Q9NYW3 318 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 FBXO5Q9UKT4 447 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 SCN4AP35499 1836 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 H3BMM5 538 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 EI24O14681 340 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 KATNA1O75449 491 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 SNAP29O95721 258 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 C1QAP02745 245 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 SERPINE1P05121 402 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 IL7P13232 177 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 RARRES1P49788 294 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 PSMC5P62195 406 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 PIGHQ14442 188 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-201ENST00000328923 GRM7Q14831 915 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 STXBP5Q5T5C0 1151 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 CDAN1Q8IWY9 1227 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 OR13J1Q8NGT2 312 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 OR8K3Q8NH51 312 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 PIP5K1AQ99755 562 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 YTHDF1Q9BYJ9 559 aaKnown RBP11.85□□□□□ -0.51
SHMT2-201ENST00000328923 FNIP2Q9P278 1114 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 EMCNQ9ULC0 261 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 OAZ3Q9UMX2 235 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 COMMD10Q9Y6G5 202 aa11.85□□□□□ -0.51
SHMT2-201ENST00000328923 SBF1O95248 1867 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 MN1Q10571 1320 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 PLD2O14939 933 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 CALCAP01258 141 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 IFNA16P05015 189 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 BMP1P13497 986 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 ALOX12P18054 663 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 GP2P55259 537 aaKnown RBP11.84□□□□□ -0.51
SHMT2-201ENST00000328923 ZNF252P-AS1Q0IIN9 211 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 FSTL1Q12841 308 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 TAZQ16635 292 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 DPY19L1Q2PZI1 675 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 PLA2G4EQ3MJ16 856 aa11.84□□□□□ -0.51
SHMT2-201ENST00000328923 SYTL1Q8IYJ3 562 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms