RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 HTATIP2Q9BUP3 242 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 GPR63Q9BZJ6 419 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 DRC3Q9H069 523 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 LINC00597Q9H2U6 94 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 ATP13A3Q9H7F0 1226 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 SPHK2Q9NRA0 654 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 IL17CQ9P0M4 197 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 HAO1Q9UJM8 370 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 HS3ST2Q9Y278 367 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 HCFC2Q9Y5Z7 792 aa14.92□□□□□ -0.02
TPM3-205ENST00000328159 A0A0U1RQS6 177 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 UBA6A0AVT1 1052 aaPredicted RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 ALPIP09923 528 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 PABPC1P11940 636 aaKnown RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 NQO1P15559 274 aaKnown RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 ATP5F1P24539 256 aaPredicted RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 SUOXP51687 545 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 SNRPD1P62314 119 aaKnown RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 PEX6Q13608 980 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 RCN2Q14257 317 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 FBXW10Q5XX13 1052 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 C22orf39Q6P5X5 142 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 ELMSAN1Q6PJG2 1045 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 LYSMD3Q7Z3D4 306 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 MAVSQ7Z434 540 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 TTC7BQ86TV6 843 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 RBM23Q86U06 439 aaKnown RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 KIF2BQ8N4N8 673 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 PAF1Q8N7H5 531 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 ZNF781Q8N8C0 355 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 ZNF557Q8N988 423 aaPredicted RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 ISG20Q96AZ6 181 aaKnown RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 RILPQ96NA2 401 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 EBF4Q9BQW3 602 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 TUBB6Q9BUF5 446 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 NMUR2Q9GZQ4 415 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 CDH19Q9H159 772 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 TLE6Q9H808 572 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 ARHGEF3Q9NR81 526 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 ARL8BQ9NVJ2 186 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 DNAJC28Q9NX36 388 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 SLC25A13Q9UJS0 675 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 VPS9D1Q9Y2B5 631 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 MRPS23Q9Y3D9 190 aaKnown RBP14.91□□□□□ -0.02
TPM3-205ENST00000328159 PKP3Q9Y446 797 aa14.91□□□□□ -0.02
TPM3-205ENST00000328159 A0A0J9YYE9 177 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 ZNF195O14628 629 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 CCDC22O60826 627 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 RASSF9O75901 435 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 TRBC1P01850 177 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 TYRP14679 529 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 SERPINA4P29622 427 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 FMO4P31512 558 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 CDKN1CP49918 316 aaPredicted RBP14.9□□□□□ -0.02
TPM3-205ENST00000328159 NAGLUP54802 743 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 DNAJB13P59910 316 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 ERVK-21P61565 698 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 KCNJ2P63252 427 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 KRT72Q14CN4 511 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 ZRANB3Q5FWF4 1079 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 LY6G5CQ5SRR4 150 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 PSAPL1Q6NUJ1 521 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 PIANPQ8IYJ0 282 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.9□□□□□ -0.02
TPM3-205ENST00000328159 TXNDC5Q8NBS9 432 aaKnown RBP14.9□□□□□ -0.02
TPM3-205ENST00000328159 ILKAPQ9H0C8 392 aaPredicted RBP14.9□□□□□ -0.02
TPM3-205ENST00000328159 LRMDAQ9H2I8 198 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 ACSS2Q9NR19 701 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 RAP2CQ9Y3L5 183 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 MTF2Q9Y483 593 aaPredicted RBP14.9□□□□□ -0.02
TPM3-205ENST00000328159 WNT6Q9Y6F9 365 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 PFDN6O15212 129 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 HNRNPCL1O60812 293 aaKnown RBP14.9□□□□□ -0.02
TPM3-205ENST00000328159 SRP72O76094 671 aaKnown RBP14.9□□□□□ -0.02
TPM3-205ENST00000328159 RHOBTB1O94844 696 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 CHRNGP07510 517 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 TFEBP19484 476 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 HMGCLP35914 325 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 TTPAP49638 278 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 IDH3AP50213 366 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 XIAPP98170 497 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 PDAP1Q13442 181 aaKnown RBP14.9□□□□□ -0.02
TPM3-205ENST00000328159 TUBB3Q13509 450 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 DMC1Q14565 340 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 MYLK3Q32MK0 819 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 ADGRD2Q7Z7M1 963 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 NUP210Q8TEM1 1887 aaPredicted RBP14.9□□□□□ -0.02
TPM3-205ENST00000328159 INPP5DQ92835 1189 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 EID2BQ96D98 161 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 OTUB2Q96DC9 234 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 CCDC126Q96EE4 140 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 MOCOSQ96EN8 888 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 NSL1Q96IY1 281 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 TMEM237Q96Q45 408 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 CEP44Q9C0F1 390 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 CCDC68Q9H2F9 335 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 POMKQ9H5K3 350 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 PIDD1Q9HB75 910 aa14.9□□□□□ -0.02
TPM3-205ENST00000328159 MARK1Q9P0L2 795 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms