RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 DGCR6Q14129 220 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 CNPY1Q3B7I2 92 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 ZNF621Q6ZSS3 439 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 C12orf56Q8IXR9 622 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 MEIOBQ8N635 442 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 TEX47Q8TBZ9 253 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 SLC9A7Q96T83 725 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 TBCCD1Q9NVR7 557 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 NCKAP1Q9Y2A7 1128 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 SLIT3O75094 1523 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 SPARCP09486 303 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 GABRB2P47870 512 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 SYT16Q17RD7 645 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 ANGEL2Q5VTE6 544 aaKnown RBP6.34□□□□□ -1.39
SSH1-202ENST00000326495 FAM46CQ5VWP2 391 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 TSEN2Q8NCE0 465 aaKnown RBP6.34□□□□□ -1.39
SSH1-202ENST00000326495 ZSCAN18Q8TBC5 510 aaPredicted RBP6.34□□□□□ -1.39
SSH1-202ENST00000326495 NDNQ99608 321 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 NT5MQ9NPB1 228 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 ZNF446Q9NWS9 450 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 CLIC5Q9NZA1 410 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 COPZ2Q9P299 210 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 POLR1DQ9Y2S0 133 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 NOTCH3Q9UM47 2321 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 FAM163BP0C2L3 166 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 FGFR1P11362 822 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 FGD3Q5JSP0 725 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 MFSD7Q6UXD7 560 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 CHST15Q7LFX5 561 aaPredicted RBP6.34□□□□□ -1.39
SSH1-202ENST00000326495 TXNRD3Q86VQ6 643 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 POU5F2Q8N7G0 328 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 NAT14Q8WUY8 206 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 APBA2Q99767 749 aa6.34□□□□□ -1.39
SSH1-202ENST00000326495 AGO4Q9HCK5 861 aaKnown RBP6.34□□□□□ -1.39
SSH1-202ENST00000326495 MTCL1Q9Y4B5 1905 aaKnown RBP6.34□□□□□ -1.39
SSH1-202ENST00000326495 RGPD1P0DJD0 1748 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 PDCD5O14737 125 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 SLC30A4O14863 429 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 SEC22BO75396 215 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 CYB5AP00167 134 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 GNAZP19086 355 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 GRIA4P48058 902 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 PRR5P85299 388 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 KLHL22Q53GT1 634 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 SV2AQ7L0J3 742 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 ADGRD2Q7Z7M1 963 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 CLP1Q92989 425 aaKnown RBP6.34□□□□□ -1.4
SSH1-202ENST00000326495 FAM163AQ96GL9 167 aaPredicted RBP6.34□□□□□ -1.4
SSH1-202ENST00000326495 KLHL32Q96NJ5 620 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 SEMA6AQ9H2E6 1030 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 RIOX1Q9H6W3 641 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 CHMP1AQ9HD42 196 aaPredicted RBP6.34□□□□□ -1.4
SSH1-202ENST00000326495 MYO16Q9Y6X6 1858 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 HEATR5BQ9P2D3 2071 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 C17orf102A2RUQ5 167 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 CLDN25C9JDP6 229 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 E2F3O00716 465 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 PER2O15055 1255 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 TCEA3O75764 348 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 MNDAP41218 407 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 ADIGQ0VDE8 80 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 EIPR1Q53HC9 387 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 OR2T34Q8NGX1 318 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 OR2T3Q8NH03 318 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 RPLP0P6Q8NHW5 317 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 ABCC6O95255 1503 aa6.34□□□□□ -1.4
SSH1-202ENST00000326495 CYB561D2O14569 222 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 MICAL2O94851 1124 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 FGFR3P22607 806 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 AUHQ13825 339 aaKnown RBP6.33□□□□□ -1.4
SSH1-202ENST00000326495 SEC23AQ15436 765 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 LRRC52Q8N7C0 313 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 ZNF606Q8WXB4 792 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 PEX13Q92968 403 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 S100A14Q9HCY8 104 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 COQ6Q9Y2Z9 468 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 COL5A2P05997 1499 aaPredicted RBP6.33□□□□□ -1.4
SSH1-202ENST00000326495 NOS1APO75052 506 aaPredicted RBP6.33□□□□□ -1.4
SSH1-202ENST00000326495 CYP7B1O75881 506 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 GLT6D1Q7Z4J2 308 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 VRK1Q99986 396 aaPredicted RBP6.33□□□□□ -1.4
SSH1-202ENST00000326495 LMAN2LQ9H0V9 348 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 RSPH9Q9H1X1 276 aaPredicted RBP6.33□□□□□ -1.4
SSH1-202ENST00000326495 TRPV5Q9NQA5 729 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 PCDHGB5Q9Y5G0 923 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 A0A1B0GVC2 190 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 CXCL11O14625 94 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 SCGNO76038 276 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 GSSP48637 474 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 SWI5Q1ZZU3 235 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 ZNF697Q5TEC3 545 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 FAXCQ5TGI0 409 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 C3P1Q6ZMU1 363 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 ZNF34Q8IZ26 560 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 KAT5Q92993 513 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 MYO19Q96H55 970 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 ACOX2Q99424 681 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 RAB11FIP5Q9BXF6 653 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 XPNPEP3Q9NQH7 507 aa6.33□□□□□ -1.4
SSH1-202ENST00000326495 GLRA2P23416 452 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms