RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 GAPDHSO14556 408 aaPredicted RBP18.4■□□□□ 0.54
USP39-201ENST00000323701 OR1I1O60431 355 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 SOCS5O75159 536 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 SNNO75324 88 aaPredicted RBP18.4■□□□□ 0.54
USP39-201ENST00000323701 WISP3O95389 354 aaPredicted RBP18.4■□□□□ 0.54
USP39-201ENST00000323701 UGT2B4P06133 528 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 CPA3P15088 417 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 POLR2EP19388 210 aaKnown RBP18.4■□□□□ 0.54
USP39-201ENST00000323701 HMGCLP35914 325 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 DGKGP49619 791 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 NAPRTQ6XQN6 538 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 METTL3Q86U44 580 aaKnown RBP18.4■□□□□ 0.54
USP39-201ENST00000323701 ETFBKMTQ8IXQ9 262 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 AHI1Q8N157 1196 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 TTC8Q8TAM2 541 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 HEXDCQ8WVB3 486 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 C10orf82Q8WW14 230 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 ECHDC3Q96DC8 303 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 CDCA3Q99618 268 aaPredicted RBP18.4■□□□□ 0.54
USP39-201ENST00000323701 GPR63Q9BZJ6 419 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 PLA2G2FQ9BZM2 168 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 HPS4Q9NQG7 708 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 IGSF5Q9NSI5 407 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 DZANK1Q9NVP4 752 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 DCTN4Q9UJW0 460 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 MED16Q9Y2X0 877 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 NUMBLQ9Y6R0 609 aa18.4■□□□□ 0.54
USP39-201ENST00000323701 C1orf232A0A0U1RR37 186 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 CXorf51AA0A1B0GTR3 108 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 GOLGA8CPA6NN73 597 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 TARM1B6A8C7 271 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 PRRT4C9JH25 899 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 HOXC11O43248 304 aaPredicted RBP18.39■□□□□ 0.53
USP39-201ENST00000323701 SERPINA4P29622 427 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 POLD2P49005 469 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 CCDC153Q494R4 210 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 TAF1BQ53T94 588 aaPredicted RBP18.39■□□□□ 0.53
USP39-201ENST00000323701 ANKRD54Q6NXT1 300 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 AFTPHQ6ULP2 937 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 TMEM184AQ6ZMB5 413 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 LMNTD2Q8IXW0 634 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 PCDH20Q8N6Y1 951 aaKnown RBP18.39■□□□□ 0.53
USP39-201ENST00000323701 CCT6BQ92526 530 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 LPGAT1Q92604 370 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 SLC2A11Q9BYW1 496 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 SUV39H2Q9H5I1 410 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 KCNK13Q9HB14 408 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 CLEC1BQ9P126 229 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 ANKRD6Q9Y2G4 727 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 ARL2BPQ9Y2Y0 163 aa18.39■□□□□ 0.53
USP39-201ENST00000323701 OGNP20774 298 aaKnown RBP18.38■□□□□ 0.53
USP39-201ENST00000323701 CRABP2P29373 138 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 MAPK8P45983 427 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 SULT2A1Q06520 285 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 ITGA9Q13797 1035 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 CSHL1Q14406 222 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 DMC1Q14565 340 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 SETMARQ53H47 684 aaPredicted RBP18.38■□□□□ 0.53
USP39-201ENST00000323701 VITQ6UXI7 678 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 PAF1Q8N7H5 531 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 ANKS4BQ8N8V4 417 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 GRAMD1AQ96CP6 724 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 CEP44Q9C0F1 390 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 HACD3Q9P035 362 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 KLHL2O95198 593 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 PMLP29590 882 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 HSF5Q4G112 596 aaPredicted RBP18.38■□□□□ 0.53
USP39-201ENST00000323701 RFLNAQ6ZTI6 216 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 OR6Y1Q8NGX8 325 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 UBXN10Q96LJ8 280 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 MYADMQ96S97 322 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 NSUN3Q9H649 340 aaKnown RBP18.38■□□□□ 0.53
USP39-201ENST00000323701 ZFYVE1Q9HBF4 777 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 GPAMQ9HCL2 828 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 GDE1Q9NZC3 331 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.38■□□□□ 0.53
USP39-201ENST00000323701 GALPQ9UBC7 116 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 XPR1Q9UBH6 696 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 SCN8AQ9UQD0 1980 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 COL4A3Q01955 1670 aa18.38■□□□□ 0.53
USP39-201ENST00000323701 UBA6A0AVT1 1052 aaPredicted RBP18.37■□□□□ 0.53
USP39-201ENST00000323701 CAPN8A6NHC0 703 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 POP4O95707 220 aaKnown RBP18.37■□□□□ 0.53
USP39-201ENST00000323701 ADH1CP00326 375 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 CTSLP07711 333 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 LHCGRP22888 699 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 FMO4P31512 558 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 SLC12A2P55011 1212 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 RPL26P61254 145 aaKnown RBP18.37■□□□□ 0.53
USP39-201ENST00000323701 STX3Q13277 289 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 GRM2Q14416 872 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 ZRANB3Q5FWF4 1079 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 RNF187Q5TA31 235 aaPredicted RBP18.37■□□□□ 0.53
USP39-201ENST00000323701 LRRC8EQ6NSJ5 796 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 CRTC1Q6UUV9 634 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 FAM151BQ6UXP7 276 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 PACS2Q86VP3 889 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 FITM2Q8N6M3 262 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 BIRC8Q96P09 236 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 CPEB1Q9BZB8 566 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms