RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 MBL2P11226 248 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-201ENST00000323668 RHOQP17081 205 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 SMPD1P17405 629 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 EIF2B2P49770 351 aaKnown RBP14.73□□□□□ -0.05
TCOF1-201ENST00000323668 DGCR6Q14129 220 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 DDR2Q16832 855 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 GCNT7Q6ZNI0 430 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 ADAMTSL2Q86TH1 951 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 CANT1Q8WVQ1 401 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 NRG4Q8WWG1 115 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 PPM1MQ96MI6 270 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 TEX12Q9BXU0 123 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 ALG2Q9H553 416 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 IGKV6-21A0A0C4DH24 114 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 ALDH7A1P49419 539 aaKnown RBP14.73□□□□□ -0.05
TCOF1-201ENST00000323668 CLCQ05315 142 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 RNF180Q86T96 592 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 EXOC2Q96KP1 924 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 UROC1Q96N76 676 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 GDAP2Q9NXN4 497 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 SUCOQ9UBS9 1254 aaKnown RBP14.73□□□□□ -0.05
TCOF1-201ENST00000323668 MT-ND1P03886 318 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 UMPSP11172 480 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 TPP2P29144 1249 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-201ENST00000323668 PIK3CGP48736 1102 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 SLC5A3P53794 718 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 RTL3Q8N8U3 475 aaKnown RBP14.73□□□□□ -0.05
TCOF1-201ENST00000323668 STYXQ8WUJ0 223 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 LINGO1Q96FE5 620 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 ZFP14Q9HCL3 533 aa14.73□□□□□ -0.05
TCOF1-201ENST00000323668 A0A1W2PQH9 124 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 FFAR3O14843 346 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 PIP5K1BO14986 540 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 GPR42O15529 346 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 OTCP00480 354 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 RPL38P63173 70 aaKnown RBP14.72□□□□□ -0.05
TCOF1-201ENST00000323668 TUSC3Q13454 348 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 ARHGAP36Q6ZRI8 547 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 FCRL3Q96P31 734 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-201ENST00000323668 ACBD6Q9BR61 282 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 EURLQ9NYK6 297 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 NFKBIEO00221 500 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 DDX5P17844 614 aaKnown RBP14.72□□□□□ -0.05
TCOF1-201ENST00000323668 DGKAP23743 735 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 DNAJB1P25685 340 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 ATP5C1P36542 298 aaKnown RBP14.72□□□□□ -0.05
TCOF1-201ENST00000323668 POLR2JP52435 117 aaKnown RBP14.72□□□□□ -0.05
TCOF1-201ENST00000323668 GALNT2Q10471 571 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 KRR1Q13601 381 aaKnown RBP14.72□□□□□ -0.05
TCOF1-201ENST00000323668 MAPK11Q15759 364 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 TMEM126BQ8IUX1 230 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 HM13Q8TCT9 377 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 TOP1MTQ969P6 601 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 MGAT4DA6NG13 374 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 A8MT66 165 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 CNOT3O75175 753 aaKnown RBP14.72□□□□□ -0.05
TCOF1-201ENST00000323668 WDR47O94967 919 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 IMPDH1P20839 514 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 PROZP22891 400 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 TRIM69Q86WT6 500 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 OR2T12Q8NG77 320 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 OSBPL6Q9BZF3 934 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 BPIFA1Q9NP55 256 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 AQP12BA6NM10 295 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 CAPN14A8MX76 684 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 H3BSA7 217 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 RGS5O15539 181 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 MZF1P28698 734 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-201ENST00000323668 ATP6V1E1P36543 226 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 SPDYE7PQ495Y7 208 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 ARMC12Q5T9G4 340 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 USP50Q70EL3 339 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-201ENST00000323668 AQP12AQ8IXF9 295 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 GATA6Q92908 595 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 BTN2A3PQ96KV6 586 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 ARAP2Q8WZ64 1704 aa14.72□□□□□ -0.05
TCOF1-201ENST00000323668 COL22A1Q8NFW1 1626 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-201ENST00000323668 UBXN8O00124 270 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 NRP1O14786 923 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 DNAJA2O60884 412 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 NIPAL4Q0D2K0 466 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 KRT33BQ14525 404 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 ZNF554Q86TJ5 538 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 TMEM135Q86UB9 458 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 OR4K2Q8NGD2 314 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 FAM210AQ96ND0 272 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 KIFC1Q9BW19 673 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 ALDH1A2O94788 518 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 PKMP14618 531 aaKnown RBP14.71□□□□□ -0.05
TCOF1-201ENST00000323668 CD52P31358 61 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 CCR10P46092 362 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 FBXO48Q5FWF7 155 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 ZNF549Q6P9A3 640 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 RALGPS2Q86X27 583 aaPredicted RBP14.71□□□□□ -0.05
TCOF1-201ENST00000323668 OFCC1Q8IZS5 231 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 PCSK9Q8NBP7 692 aaKnown RBP14.71□□□□□ -0.05
TCOF1-201ENST00000323668 SPPL2AQ8TCT8 520 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 SELENOMQ8WWX9 145 aa14.71□□□□□ -0.05
TCOF1-201ENST00000323668 SMPD4Q9NXE4 827 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms