RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 PPHLN1Q8NEY8 458 aaKnown RBP16.32■□□□□ 0.2
CACFD1-202ENST00000316948 SLC16A10Q8TF71 515 aa16.32■□□□□ 0.2
CACFD1-202ENST00000316948 HDAC11Q96DB2 347 aa16.32■□□□□ 0.2
CACFD1-202ENST00000316948 HOPXQ9BPY8 73 aaPredicted RBP16.32■□□□□ 0.2
CACFD1-202ENST00000316948 ING2Q9H160 280 aa16.32■□□□□ 0.2
CACFD1-202ENST00000316948 GSTO2Q9H4Y5 243 aa16.32■□□□□ 0.2
CACFD1-202ENST00000316948 RIC8BQ9NVN3 520 aa16.32■□□□□ 0.2
CACFD1-202ENST00000316948 WARS2Q9UGM6 360 aaKnown RBP16.32■□□□□ 0.2
CACFD1-202ENST00000316948 SLC30A1Q9Y6M5 507 aa16.32■□□□□ 0.2
CACFD1-202ENST00000316948 BRCA1P38398 1863 aaKnown RBP16.31■□□□□ 0.2
CACFD1-202ENST00000316948 DFFAO00273 331 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 NCAM2O15394 837 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 HUS1O60921 280 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 PMPCBO75439 489 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 FYNP06241 537 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 GSTT2P0CG29 244 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 GSTT2BP0CG30 244 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 NPR3P17342 541 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 CHRNA4P43681 627 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 IREB2P48200 963 aaKnown RBP16.31■□□□□ 0.2
CACFD1-202ENST00000316948 TKTL1P51854 596 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 RPS6KA2Q15349 733 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 IRAK1BP1Q5VVH5 260 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 LCN8Q6JVE9 175 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 PAQR9Q6ZVX9 377 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 BNIPLQ7Z465 357 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 LINC00523Q86TU6 105 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 ANKRD49Q8WVL7 239 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 CSF3RQ99062 836 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 LHPPQ9H008 270 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 HACD3Q9P035 362 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 TMEM9Q9P0T7 183 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 SLC27A5Q9Y2P5 690 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 NDUFAF1Q9Y375 327 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 YJEFN3A6XGL0 299 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 FXYD1O00168 92 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 MTSS1O43312 755 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 EEF1DP29692 281 aaKnown RBP16.31■□□□□ 0.2
CACFD1-202ENST00000316948 RFC2P35250 354 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 BAG6P46379 1132 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 NOTUMQ6P988 496 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 CLEC20AQ6ZU45 233 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 CNTN4Q8IWV2 1026 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 SMG8Q8ND04 991 aaKnown RBP16.31■□□□□ 0.2
CACFD1-202ENST00000316948 LRRC58Q96CX6 371 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 TNIP3Q96KP6 325 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 MED10Q9BTT4 135 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 BEGAINQ9BUH8 593 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 DDIT4Q9NX09 232 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 CACNG4Q9UBN1 327 aa16.31■□□□□ 0.2
CACFD1-202ENST00000316948 COL1A2P08123 1366 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 SCN4AP35499 1836 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 E2F6O75461 281 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 ALBP02768 609 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 LTA4HP09960 611 aaKnown RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 DNAJB1P25685 340 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 OPRL1P41146 370 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 KCNC1P48547 511 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 TAF6P49848 677 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 TMBIM6P55061 237 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 POU4F1Q01851 419 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 GRSF1Q12849 480 aaKnown RBP eCLIP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 BNIP2Q12982 314 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 UGT3A2Q3SY77 523 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 TMEM214Q6NUQ4 689 aaKnown RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 ZNF773Q6PK81 442 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 PIWIL3Q7Z3Z3 882 aaKnown RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 CCDC126Q96EE4 140 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 ULBP1Q9BZM6 244 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 MROH8Q9H579 483 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 WDR6Q9NNW5 1121 aaKnown RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 PALMDQ9NP74 551 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 SACM1LQ9NTJ5 587 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 ABCD2Q9UBJ2 740 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 PSME2Q9UL46 239 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 USP22Q9UPT9 525 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 RBMX2Q9Y388 322 aaKnown RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 FAM32AQ9Y421 112 aaKnown RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 RAD54BQ9Y620 910 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 TRIM64BA6NI03 449 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 H3BMM5 538 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 RSL1D1O76021 490 aaKnown RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 LDLRP01130 860 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 MBL2P11226 248 aaPredicted RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 HSD17B1P14061 328 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 IDUAP35475 653 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 NOMO2Q5JPE7 1267 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 NEPROQ6NW34 567 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 COLGALT2Q8IYK4 626 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 MIER2Q8N344 545 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 RYBPQ8N488 228 aaPredicted RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 VPS33AQ96AX1 596 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 BRD8Q9H0E9 1235 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 RAD21L1Q9H4I0 556 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 RMI1Q9H9A7 625 aa16.3■□□□□ 0.2
CACFD1-202ENST00000316948 PIN4Q9Y237 131 aaKnown RBP16.3■□□□□ 0.2
CACFD1-202ENST00000316948 RALGAPA2Q2PPJ7 1873 aa16.29■□□□□ 0.2
CACFD1-202ENST00000316948 TTC24A2A3L6 582 aaPredicted RBP16.29■□□□□ 0.2
CACFD1-202ENST00000316948 BBIP1A8MTZ0 92 aa16.29■□□□□ 0.2
CACFD1-202ENST00000316948 SHMT2P34897 504 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms