RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 CDK2AP1O14519 115 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 BET1O15155 118 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 MSH4O15457 936 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 SLC37A4O43826 429 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 ABCB7O75027 752 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 RFPL1O75677 317 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 SORBS2O94875 1100 aaKnown RBP4.21□□□□□ -1.74
POLR2B-201ENST00000314595 KLHL2O95198 593 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 ITGAVP06756 1048 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 HOXB1P14653 301 aaPredicted RBP4.21□□□□□ -1.74
POLR2B-201ENST00000314595 ITGB6P18564 788 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 PRKCHP24723 683 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 TKTP29401 623 aaKnown RBP4.21□□□□□ -1.74
POLR2B-201ENST00000314595 NUDT1P36639 197 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 GRIA4P48058 902 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 SOX9P48436 509 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 PPP3CCP48454 512 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 AP3M2P53677 418 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 HERC3Q15034 1050 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 KCTD19Q17RG1 926 aaPredicted RBP4.21□□□□□ -1.74
POLR2B-201ENST00000314595 HP1BP3Q5SSJ5 553 aaPredicted RBP4.21□□□□□ -1.74
POLR2B-201ENST00000314595 XAF1Q6GPH4 301 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 HMBOX1Q6NT76 420 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 PAOXQ6QHF9 649 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 SLC16A12Q6ZSM3 486 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 USP43Q70EL4 1123 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 DNAAF5Q86Y56 855 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 SLC41A1Q8IVJ1 513 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 TPH2Q8IWU9 490 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 HS6ST3Q8IZP7 471 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 PACRGLQ8N7B6 248 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 CCDC89Q8N998 374 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 SLC7A3Q8WY07 619 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 CRELD1Q96HD1 420 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 ZKSCAN3Q9BRR0 538 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 YTHDF1Q9BYJ9 559 aaKnown RBP4.21□□□□□ -1.74
POLR2B-201ENST00000314595 NXF2Q9GZY0 626 aaKnown RBP4.21□□□□□ -1.74
POLR2B-201ENST00000314595 RMND5AQ9H871 391 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 NPHS2Q9NP85 383 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 CUEDC1Q9NWM3 386 aaPredicted RBP4.21□□□□□ -1.74
POLR2B-201ENST00000314595 NKIRAS1Q9NYS0 192 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 GCNT4Q9P109 453 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 SLC17A7Q9P2U7 560 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 VAV3Q9UKW4 847 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 ARHGAP26Q9UNA1 814 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 TCAF1Q9Y4C2 921 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 TRAF6Q9Y4K3 522 aa4.21□□□□□ -1.74
POLR2B-201ENST00000314595 KLF2Q9Y5W3 355 aaPredicted RBP4.21□□□□□ -1.74
POLR2B-201ENST00000314595 TRIM24O15164 1050 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 LIASO43766 372 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 MTRF1O75570 445 aaKnown RBP4.2□□□□□ -1.74
POLR2B-201ENST00000314595 RFPL3O75679 317 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 BCAS2O75934 225 aaPredicted RBP4.2□□□□□ -1.74
POLR2B-201ENST00000314595 PGM3O95394 542 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 PRAMEF12O95522 483 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 NFATC1O95644 943 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 FAM58BPP0C7Q3 252 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 ADRA1DP25100 572 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 ELAVL4P26378 380 aaKnown RBP4.2□□□□□ -1.74
POLR2B-201ENST00000314595 ARRB2P32121 409 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 STAT1P42224 750 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 GRIA3P42263 894 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 MATKP42679 507 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 DHPSP49366 369 aaPredicted RBP4.2□□□□□ -1.74
POLR2B-201ENST00000314595 HARS2P49590 506 aaKnown RBP4.2□□□□□ -1.74
POLR2B-201ENST00000314595 PHC1P78364 1004 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 CLDN10P78369 228 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.2□□□□□ -1.74
POLR2B-201ENST00000314595 RHPN2Q8IUC4 686 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 SRRM1Q8IYB3 904 aaKnown RBP4.2□□□□□ -1.74
POLR2B-201ENST00000314595 CCDC33Q8N5R6 958 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 GOLM1Q8NBJ4 401 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 EPS8L1Q8TE68 723 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 SLC44A1Q8WWI5 657 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 PRPF31Q8WWY3 499 aaKnown RBP4.2□□□□□ -1.74
POLR2B-201ENST00000314595 C12orf43Q96C57 262 aaKnown RBP4.2□□□□□ -1.74
POLR2B-201ENST00000314595 RTP4Q96DX8 246 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 SERAC1Q96JX3 654 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 CLPTM1LQ96KA5 538 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 FAM20AQ96MK3 541 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 ZFP42Q96MM3 310 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 CSF3RQ99062 836 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 SP140LQ9H930 580 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 FBRSQ9HAH7 460 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 GTSE1Q9NYZ3 720 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 SELENONQ9NZV5 590 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 SEPT3Q9UH03 358 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 EMCNQ9ULC0 261 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 GINS2Q9Y248 185 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 N6AMT1Q9Y5N5 214 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 E2F8A0AVK6 867 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 PRRG1O14668 218 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 DCLK1O15075 740 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 AKAP10O43572 662 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 PSTPIP1O43586 416 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 SLC28A2O43868 658 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 ALX3O95076 343 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 SPATA31C1P0DKV0 1188 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 BMP2P12643 396 aa4.2□□□□□ -1.74
POLR2B-201ENST00000314595 NFKBIAP25963 317 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms