RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 ARRDC2Q8TBH0 407 aa8.42□□□□□ -1.06
MSL3-201ENST00000312196 ZNF830Q96NB3 372 aaPredicted RBP8.42□□□□□ -1.06
MSL3-201ENST00000312196 RNF157Q96PX1 679 aa8.42□□□□□ -1.06
MSL3-201ENST00000312196 CCDC3Q9BQI4 270 aa8.42□□□□□ -1.06
MSL3-201ENST00000312196 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.42□□□□□ -1.06
MSL3-201ENST00000312196 ETNK2Q9NVF9 386 aa8.42□□□□□ -1.06
MSL3-201ENST00000312196 IFNKQ9P0W0 207 aa8.42□□□□□ -1.06
MSL3-201ENST00000312196 PDP2Q9P2J9 529 aa8.42□□□□□ -1.06
MSL3-201ENST00000312196 DOCK9Q9BZ29 2069 aa8.42□□□□□ -1.06
MSL3-201ENST00000312196 A0A0A6YYK5 440 aaPredicted RBP8.41□□□□□ -1.06
MSL3-201ENST00000312196 SYCE3A1L190 88 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 PRSS38A1L453 326 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 D6RAR5 112 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 NVLO15381 856 aaKnown RBP8.41□□□□□ -1.06
MSL3-201ENST00000312196 MTSS1O43312 755 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 USP12O75317 370 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 CEACAM5P06731 702 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 CCNB1P14635 433 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 ITIH2P19823 946 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 KDELR1P24390 212 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 CCDC173Q0VFZ6 552 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 TBX2Q13207 712 aaPredicted RBP8.41□□□□□ -1.06
MSL3-201ENST00000312196 SPIDRQ14159 915 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 ACOX1Q15067 660 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 ZSCAN23Q3MJ62 389 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 LUZP1Q86V48 1076 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 MARCH9Q86YJ5 346 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 HID1Q8IV36 788 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 PQLC3Q8N755 202 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 KYQ8NBH2 561 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 HSPH1Q92598 858 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 TDRD1Q9BXT4 1180 aaKnown RBP8.41□□□□□ -1.06
MSL3-201ENST00000312196 ADNPQ9H2P0 1102 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 TCEAL2Q9H3H9 227 aaPredicted RBP8.41□□□□□ -1.06
MSL3-201ENST00000312196 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.41□□□□□ -1.06
MSL3-201ENST00000312196 DOLKQ9UPQ8 538 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 PCDHGA3Q9Y5H0 932 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 PCCBP05166 539 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 EPHA4P54764 986 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 CDK3Q00526 305 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 ARHGEF7Q14155 803 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 PDK1Q15118 436 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 TAF1BQ53T94 588 aaPredicted RBP8.41□□□□□ -1.06
MSL3-201ENST00000312196 ZDHHC20Q5W0Z9 365 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 CRTC1Q6UUV9 634 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 KDM7AQ6ZMT4 941 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 CNGA4Q8IV77 575 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 KCTD6Q8NC69 237 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 PLA2G15Q8NCC3 412 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 CCDC74AQ96AQ1 378 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 EXOC2Q96KP1 924 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 OLFM3Q96PB7 478 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 GFM1Q96RP9 751 aaKnown RBP8.41□□□□□ -1.06
MSL3-201ENST00000312196 ABCG8Q9H221 673 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 FGF22Q9HCT0 170 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 TUBD1Q9UJT1 453 aa8.41□□□□□ -1.06
MSL3-201ENST00000312196 C3orf70A6NLC5 250 aaPredicted RBP8.4□□□□□ -1.06
MSL3-201ENST00000312196 OR5K4A6NMS3 321 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 WISP1O95388 367 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 EPOP01588 193 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 PRKCGP05129 697 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 FECHP22830 423 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 CASP14P31944 242 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 NUMBP49757 651 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 CSRP3P50461 194 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 PDX1P52945 283 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 ILF3Q12906 894 aaKnown RBP eCLIP8.4□□□□□ -1.06
MSL3-201ENST00000312196 ZNF542PQ5EBM4 170 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 HSD11B1LQ7Z5J1 315 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 SPRED1Q7Z699 444 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 NRROSQ86YC3 692 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 CCNJLQ8IV13 435 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 SLITRK4Q8IW52 837 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 TSACCQ96A04 125 aaPredicted RBP8.4□□□□□ -1.06
MSL3-201ENST00000312196 SH3KBP1Q96B97 665 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 CRELD1Q96HD1 420 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 CLMPQ9H6B4 373 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 MAGEE1Q9HCI5 957 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 CTTNBP2NLQ9P2B4 639 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 EFR3BQ9Y2G0 817 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 COQ6Q9Y2Z9 468 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 PCDHB1Q9Y5F3 818 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 SCN8AQ9UQD0 1980 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 ATRXP46100 2492 aa8.4□□□□□ -1.06
MSL3-201ENST00000312196 CPED1A4D0V7 1026 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 BTNL10A8MVZ5 291 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 HACD1B0YJ81 288 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 B4E171 279 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 PSTPIP1O43586 416 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 MFSD11O43934 449 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 MFAP3LO75121 409 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 SOD1P00441 154 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 PRLP01236 227 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 FGF1P05230 155 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 TCF4P15884 667 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 LHCGRP22888 699 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 TSPAN7P41732 249 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 FASLGP48023 281 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 CCL7P80098 99 aa8.4□□□□□ -1.07
MSL3-201ENST00000312196 CLN3Q13286 438 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms