RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TNS4Q8IZW8 715 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ZSWIM2Q8NEG5 633 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 PPP1R36Q96LQ0 422 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CDT1Q9H211 546 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 LRRC19Q9H756 370 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CCNB1IP1Q9NPC3 277 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 EIF2B3Q9NR50 452 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ATXN10Q9UBB4 475 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 USP54Q70EL1 1684 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 EDDM13A0A1B0GTR0 161 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 OR2AG2A6NM03 316 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 WASHC1A8K0Z3 465 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 WASH3PC4AMC7 463 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 MCIDASD6RGH6 385 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RGS5O15539 181 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ESR1P03372 595 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 NR2F6P10588 404 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 UMPSP11172 480 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 FDPSP14324 419 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 MMP8P22894 467 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 PKNOX1P55347 436 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 HSPA14Q0VDF9 509 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 MRPL49Q13405 166 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 KCNC3Q14003 757 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 EIPR1Q53HC9 387 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 LIPMQ5VYY2 423 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 WASH2PQ6VEQ5 465 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TPGS1Q6ZTW0 290 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 EIF3MQ7L2H7 374 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 GALNT7Q86SF2 657 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 KREMEN2Q8NCW0 462 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TSTD1Q8NFU3 115 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF461Q8TAF7 563 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 EMID1Q96A84 441 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CENPTQ96BT3 561 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 LRRC1Q9BTT6 524 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CDADC1Q9BWV3 514 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SLC25A51Q9H1U9 297 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SFXN1Q9H9B4 322 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 LEF1Q9UJU2 399 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TDRD15B5MCY1 1934 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 MYL12BO14950 172 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 USP2O75604 605 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ZSCAN5DPP0CG00 497 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SGO1Q5FBB7 561 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 VARS2Q5ST30 1063 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 WSCD1Q658N2 575 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 MZT2AQ6P582 158 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 OTOP2Q7RTS6 562 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ADGRD2Q7Z7M1 963 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SHC3Q92529 594 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TM9SF4Q92544 642 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SPOCK2Q92563 424 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 APOPT1Q96IL0 206 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 C9orf72Q96LT7 481 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 FAM83CQ9BQN1 747 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 FICDQ9BVA6 458 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 NUSAP1Q9BXS6 441 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ACE2Q9BYF1 805 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RHOJQ9H4E5 214 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RABL2AQ9UBK7 228 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 GGA2Q9UJY4 613 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RABL2BQ9UNT1 228 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 KCNU1A8MYU2 1149 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM150CB9EJG8 249 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 PLK4O00444 970 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CCNB2O95067 398 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CHN1P15882 459 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 IL4RP24394 825 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 MANFP55145 182 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CASP7P55210 303 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TXNL4AP83876 142 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TNK2Q07912 1038 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SERINC3Q13530 473 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 THOC7Q6I9Y2 204 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ARL9Q6T311 187 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RD3Q7Z3Z2 195 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 AMZ2Q86W34 360 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ADGRG2Q8IZP9 1017 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 GPR156Q8NFN8 814 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TEKT5Q96M29 485 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 PAFAH2Q99487 392 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 NDC1Q9BTX1 674 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 FAM83DQ9H4H8 585 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TDP1Q9NUW8 608 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 DNAJC28Q9NX36 388 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 DMGDHQ9UI17 866 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SATB2Q9UPW6 733 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TMED5Q9Y3A6 229 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 PCDHGB2Q9Y5G2 931 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RALGAPA1Q6GYQ0 2036 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SLC22A2O15244 555 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 YKT6O15498 198 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CCNT2O60583 730 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CDK14O94921 469 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 C22orf31O95567 290 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 LDLRP01130 860 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CCDC159P0C7I6 412 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 NR2F1P10589 423 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF23P17027 643 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms