RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 SLC39A10Q9ULF5 831 aa22.52■■□□□ 1.2
IRF3-201ENST00000309877 C16orf96A6NNT2 1141 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 UPK3BL1B0FP48 263 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 UPK3BL2E5RIL1 263 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 H7C0S8 307 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 ZWINTO95229 277 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 S1PR4O95977 384 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 HNRNPLP14866 589 aaKnown RBP eCLIP22.51■■□□□ 1.19
IRF3-201ENST00000309877 TIMP2P16035 220 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 POLD2P49005 469 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 ILF2Q12905 390 aaKnown RBP22.51■■□□□ 1.19
IRF3-201ENST00000309877 USP10Q14694 798 aaKnown RBP22.51■■□□□ 1.19
IRF3-201ENST00000309877 POM121L1PQ3SYA9 428 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 ZRANB3Q5FWF4 1079 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 LRRC73Q5JTD7 316 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 LRRC66Q68CR7 880 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 CNSTQ6PJW8 725 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 DSG4Q86SJ6 1040 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 TTC7BQ86TV6 843 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 TAX1BP1Q86VP1 789 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 CENPTQ96BT3 561 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 C8orf33Q9H7E9 229 aaPredicted RBP22.51■■□□□ 1.19
IRF3-201ENST00000309877 MLXIPLQ9NP71 852 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 SLC30A1Q9Y6M5 507 aa22.51■■□□□ 1.19
IRF3-201ENST00000309877 FAM95CA0A1B0GW59 222 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 NPC1O15118 1278 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 TM9SF1O15321 606 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 SAT1P21673 171 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 CCT5P48643 541 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 ARHGEF7Q14155 803 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 LRRC14Q15048 493 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 RALGPS2Q86X27 583 aaPredicted RBP22.5■■□□□ 1.19
IRF3-201ENST00000309877 CHPFQ8IZ52 775 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 ZNF513Q8N8E2 541 aaPredicted RBP22.5■■□□□ 1.19
IRF3-201ENST00000309877 GPATCH11Q8N954 259 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 PIP4K2CQ8TBX8 421 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 TCP10LQ8TDR4 215 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 ISL2Q96A47 359 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 PBXIP1Q96AQ6 731 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 ELMO2Q96JJ3 720 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 PAIP2Q9BPZ3 127 aaKnown RBP22.5■■□□□ 1.19
IRF3-201ENST00000309877 PPM1HQ9ULR3 514 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 STON1Q9Y6Q2 735 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 PIAS3Q9Y6X2 628 aa22.5■■□□□ 1.19
IRF3-201ENST00000309877 ANTXRLA6NF34 631 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 PFDN6O15212 129 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 MPOP05164 745 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 VIPR1P32241 457 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 FOXN2P32314 431 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 CLCN5P51795 746 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 SEC13P55735 322 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 PEX6Q13608 980 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 SEMA3AQ14563 771 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 SMAD2Q15796 467 aaKnown RBP22.49■■□□□ 1.19
IRF3-201ENST00000309877 ZNF789Q5FWF6 425 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 GPR153Q6NV75 609 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 CMC1Q7Z7K0 106 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 DEFB123Q8N688 67 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 DENND1AQ8TEH3 1009 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 SCG3Q8WXD2 468 aaKnown RBP22.49■■□□□ 1.19
IRF3-201ENST00000309877 DNASE1L2Q92874 299 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 CABS1Q96KC9 395 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 FAM129BQ96TA1 746 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 VPS11Q9H270 941 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 CAB39LQ9H9S4 337 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 PCDH12Q9NPG4 1184 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 APPL1Q9UKG1 709 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 SARDHQ9UL12 918 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 BRWD1Q9NSI6 2320 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 XIRP2A4UGR9 3374 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 K7EQS6 105 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 IL1BP01584 269 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 WASP42768 502 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 NEK3P51956 506 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 STC1P52823 247 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 XIAPP98170 497 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 GABPB1Q06547 395 aaPredicted RBP22.49■■□□□ 1.19
IRF3-201ENST00000309877 PDE1CQ14123 709 aaPredicted RBP22.49■■□□□ 1.19
IRF3-201ENST00000309877 AARS2Q5JTZ9 985 aaKnown RBP22.49■■□□□ 1.19
IRF3-201ENST00000309877 HHATQ5VTY9 493 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 ERAP2Q6P179 960 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 TXNDC11Q6PKC3 985 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 RAPH1Q70E73 1250 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 SLC41A1Q8IVJ1 513 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 PNPLA1Q8N8W4 532 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 ACVR1CQ8NER5 493 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.49■■□□□ 1.19
IRF3-201ENST00000309877 PPP1R16AQ96I34 528 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 GUCD1Q96NT3 240 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 TCF12Q99081 682 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 PRSS16Q9NQE7 514 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 HEBP1Q9NRV9 189 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 INTS10Q9NVR2 710 aaKnown RBP22.49■■□□□ 1.19
IRF3-201ENST00000309877 MKS1Q9NXB0 559 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 PSD3Q9NYI0 1048 aa22.49■■□□□ 1.19
IRF3-201ENST00000309877 MUC22E2RYF6 1773 aaPredicted RBP22.48■■□□□ 1.19
IRF3-201ENST00000309877 TICRRQ7Z2Z1 1910 aa22.48■■□□□ 1.19
IRF3-201ENST00000309877 SHOX2O60902 331 aaPredicted RBP22.48■■□□□ 1.19
IRF3-201ENST00000309877 NDUFS3O75489 264 aa22.48■■□□□ 1.19
IRF3-201ENST00000309877 ASGR2P07307 311 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms