RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 FAM13CQ8NE31 585 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 CMASQ8NFW8 434 aaPredicted RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 PHF21BQ96EK2 531 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 ASB16Q96NS5 453 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 MCMBPQ9BTE3 642 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 C2orf49Q9BVC5 232 aaPredicted RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 GTPBP2Q9BX10 602 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 SPATA16Q9BXB7 569 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 IQCGQ9H095 443 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 CSNK1G1Q9HCP0 422 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 PCMTD2Q9NV79 361 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 ELOVL2Q9NXB9 296 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 FBXL12Q9NXK8 326 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 NINJ2Q9NZG7 142 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 SIRPGQ9P1W8 387 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 SLC8A2Q9UPR5 921 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 USP3Q9Y6I4 520 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 DNMT3AQ9Y6K1 912 aaPredicted RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 ICE1Q9Y2F5 2266 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 A0A1B0GVM2 712 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 TCAF2A6NFQ2 919 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 PSTPIP1O43586 416 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 OR1I1O60431 355 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 MOSPD3O75425 235 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 LUC7L3O95232 432 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 CFIP05156 583 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 INHBAP08476 426 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 HOXD9P28356 352 aaPredicted RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 ETV3P41162 512 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 MSH2P43246 934 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 MAGEA4P43358 317 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 SLC12A2P55011 1212 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 GPX6P59796 221 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 NR1H3Q13133 447 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 DDX39BQ13838 428 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 PRPSAP1Q14558 356 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 DUSP6Q16828 381 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 C1orf53Q5VUE5 145 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 PM20D1Q6GTS8 502 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 STRADAQ7RTN6 431 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 KATNAL2Q8IYT4 538 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 ARHGAP18Q8N392 663 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 SLC44A3Q8N4M1 653 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 RTL3Q8N8U3 475 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 GRAMD1AQ96CP6 724 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 GUCD1Q96NT3 240 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 HERC2P3Q9BVR0 1158 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 GPR174Q9BXC1 333 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 RAB17Q9H0T7 212 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 RBM38Q9H0Z9 239 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 MRPL40Q9NQ50 206 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 ZDHHC7Q9NXF8 308 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 SERGEFQ9UGK8 458 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 ZNHIT2Q9UHR6 403 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 PSAT1Q9Y617 370 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 CLUHO75153 1309 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 ZNF106Q9H2Y7 1883 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 EDF1O60869 148 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 ATP6V1C1P21283 382 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 POLD2P49005 469 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 OVGP1Q12889 678 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 TEX44Q53QW1 395 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 SLC45A4Q5BKX6 768 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 ZNF789Q5FWF6 425 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 PITRM1Q5JRX3 1037 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 BBS12Q6ZW61 710 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 CHST15Q7LFX5 561 aaPredicted RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 GLT6D1Q7Z4J2 308 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 TRAPPC5Q8IUR0 188 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 CELF5Q8N6W0 485 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 CCDC197Q8NCU1 140 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 CPT1BQ92523 772 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 PTPRN2Q92932 1015 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 PKMYT1Q99640 499 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 FAM126AQ9BYI3 521 aaPredicted RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 RNPEPL1Q9HAU8 725 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 IRAK4Q9NWZ3 460 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 FKBPLQ9UIM3 349 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 TDRD15B5MCY1 1934 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 A0A1W2PPM1 405 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 TCRBV21S2A2A0A5A6 115 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 PDZK1P1A8MUH7 402 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 CXorf49A8MYA2 514 aaPredicted RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 RGS16O15492 202 aaPredicted RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 RB1P06400 928 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 ATP5BP06576 529 aaKnown RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 VIMP08670 466 aaKnown RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 MX2P20592 715 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 CPOXP36551 454 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 MAGEA3P43357 314 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 ARSDP51689 593 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 NEK3P51956 506 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 PDE1CQ14123 709 aaPredicted RBP4.94□□□□□ -1.62
CAST-201ENST00000309190 ACAP1Q15027 740 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 FUT11Q495W5 492 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 C4orf46Q504U0 113 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 RAET1GQ6H3X3 334 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 UNC5AQ6ZN44 842 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 PIM3Q86V86 326 aa4.94□□□□□ -1.62
CAST-201ENST00000309190 TMC8Q8IU68 726 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms