RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 GOLGA8IPA6NC78 632 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ANTXRLA6NF34 631 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 GOLGA8JA6NMD2 632 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TISP43B9A030 160 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 E7ESA3 106 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 MAN2B1O00754 1011 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 PRRG1O14668 218 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 PPEF2O14830 753 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 KLF11O14901 512 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CLGNO14967 610 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 PPP1R12AO14974 1030 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 NCAM2O15394 837 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 DIAPH2O60879 1101 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 DNAJC6O75061 913 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 LRP3O75074 770 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SOAT2O75908 522 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 PRAMEF12O95522 483 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TOP3BO95985 862 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 HLA-DRAP01903 254 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 LRG1P02750 347 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TROVE2P10155 538 aaKnown RBP eCLIP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 MYL4P12829 197 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 KRT5P13647 590 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 KCNE1P15382 129 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ACADSP16219 412 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CREB1P16220 341 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF28P17035 718 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 GNAZP19086 355 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 MMP8P22894 467 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 FPR2P25090 351 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 GCAP28676 217 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CDH5P33151 784 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 NAMPTP43490 491 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CXCL12P48061 93 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 PXNP49023 591 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CCR3P51677 355 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ZNF132P52740 706 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ARL4CP56559 192 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 GEMIN4P57678 1058 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 MRPS35P82673 323 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 FCHO2Q0JRZ9 810 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 MAMLD1Q13495 774 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SNX1Q13596 522 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CUL2Q13617 745 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SIM2Q14190 667 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 KRT72Q14CN4 511 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 NAA25Q14CX7 972 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ACAP1Q15027 740 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 PON2Q15165 354 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TMED2Q15363 201 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 OASLQ15646 514 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ZRSR2Q15696 482 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SGSM1Q2NKQ1 1148 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 KLHL38Q2WGJ6 581 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 P3H1Q32P28 736 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SLC10A6Q3KNW5 377 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 DCAF4L1Q3SXM0 396 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ACCSLQ4AC99 568 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TFDP3Q5H9I0 405 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ANKRD20A2Q5SQ80 823 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 UBAP2Q5T6F2 1119 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 RNASEH2BQ5TBB1 312 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ANKRD20A1Q5TYW2 823 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 HHATQ5VTY9 493 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ANKRD20A3Q5VUR7 823 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 NAIF1Q69YI7 327 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 KIAA1211LQ6NV74 962 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SLC39A4Q6P5W5 647 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 GSTA5Q7RTV2 222 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 APBB1IPQ7Z5R6 666 aaPredicted RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 KBTBD6Q86V97 674 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CHSY1Q86X52 802 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 LMNTD2Q8IXW0 634 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 PPIL6Q8IXY8 311 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SPEM1Q8N4L4 309 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 UBR7Q8N806 425 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ATP11CQ8NB49 1132 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 GDAP1Q8TB36 358 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SLC35B2Q8TB61 432 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 MGARPQ8TDB4 240 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 C10orf82Q8WW14 230 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ATG4AQ8WYN0 398 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CCDC127Q96BQ5 260 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TBC1D31Q96DN5 1066 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SAAL1Q96ER3 474 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TRMT2BQ96GJ1 504 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 NAF1Q96HR8 494 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 RMDN2Q96LZ7 410 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 UROC1Q96N76 676 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 SLITRK1Q96PX8 696 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 FNBP1Q96RU3 617 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TMEM209Q96SK2 561 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 CGRRF1Q99675 332 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 HERPUD2Q9BSE4 406 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 DHRS4Q9BTZ2 278 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TARS2Q9BW92 718 aaKnown RBP4.98□□□□□ -1.61
CKS1B-201ENST00000308987 TMEM168Q9H0V1 697 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 C2orf40Q9H1Z8 148 aa4.98□□□□□ -1.61
CKS1B-201ENST00000308987 ARRDC1-AS1Q9H2J1 176 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms