RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 TM7SF3Q9NS93 570 aa10.99□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 FEZ2Q9UHY8 353 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CD84Q9UIB8 345 aa10.99□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SHOC2Q9UQ13 582 aa10.99□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 DRG1Q9Y295 367 aaKnown RBP10.99□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 FNDC3AQ9Y2H6 1198 aaKnown RBP10.99□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SAR1BQ9Y6B6 198 aa10.99□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 A0A0U1RQS6 177 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 A0A1B0GTQ1 180 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ERI2A8K979 691 aaKnown RBP10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PDE2AO00408 941 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SLC30A4O14863 429 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ZNF185O15231 689 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PHF2O75151 1096 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 METTL18O95568 372 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 GAS8O95995 478 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 AGTP01019 485 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ATXN1LP0C7T5 689 aaKnown RBP10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KELP23276 732 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PAFAH1B1P43034 410 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CHRNA4P43681 627 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KCNJ1P48048 391 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 BASP1P80723 227 aaKnown RBP10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 IL9RQ01113 521 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PTSQ03393 145 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SLC14A1Q13336 389 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 NFATC4Q14934 902 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 HS1BP3Q53T59 392 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PAPD7Q5XG87 772 aaKnown RBP10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PNCKQ6P2M8 343 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PPP1R21Q6ZMI0 780 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 MACC1Q6ZN28 852 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 Q6ZVL8 140 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ZNF765Q7L2R6 523 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 LINC00523Q86TU6 105 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SLC22A18ASQ8N1D0 253 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 TAB3Q8N5C8 712 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PRELID2Q8N945 189 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 APOL2Q9BQE5 337 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 GORASP1Q9BQQ3 440 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RTKNQ9BST9 563 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 APOOQ9BUR5 198 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 IL21RQ9HBE5 538 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 DNAJC28Q9NX36 388 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SMARCAL1Q9NZC9 954 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PKP3Q9Y446 797 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 OR1A2Q9Y585 309 aa10.98□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PLXNB3Q9ULL4 1909 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ZFHX2Q9C0A1 2572 aaPredicted RBP10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SPTY2D1-AS1A0A0U1RR47 76 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RGSL1A5PLK6 1076 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 FLRT2O43155 660 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 AP2A1O95782 977 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 GM2AP17900 193 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KCNA4P22459 653 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 EPHA8P29322 1005 aaPredicted RBP10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ID4P47928 161 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SPINT3P49223 89 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 FNTAP49354 379 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 BLKP51451 505 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KIAA1024LP59773 190 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 HNRNPKP61978 463 aaKnown RBP eCLIP10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PDE1BQ01064 536 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 DPTQ07507 201 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ALS2CLQ60I27 953 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CCDC137Q6PK04 289 aaKnown RBP10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ENPP7Q6UWV6 458 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 TECPR1Q7Z6L1 1165 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 HEATR4Q86WZ0 1026 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SPATS2Q86XZ4 545 aaKnown RBP10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PDCD7Q8N8D1 485 aaKnown RBP10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 DNAAF3Q8N9W5 541 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PLA2G15Q8NCC3 412 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 BTN2A2Q8WVV5 523 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 WDR92Q96MX6 357 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SLC13A1Q9BZW2 595 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CDH19Q9H159 772 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ABCG8Q9H221 673 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 SLC32A1Q9H598 525 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ETNK1Q9HBU6 452 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RAB6BQ9NRW1 208 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 GPR27Q9NS67 375 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 KLQ9UEF7 1012 aa10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 COL5A1P20908 1838 aaPredicted RBP10.97□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 C2orf81A6NN90 581 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 USP12O75317 370 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 CRTAMO95727 393 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 APRTP07741 180 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 MYCLP1P12525 358 aaPredicted RBP10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ETS1P14921 441 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 JUNDP17535 347 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 TEAD1P28347 426 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ADRA1AP35348 466 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 COILP38432 576 aaPredicted RBP10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 RXRGP48443 463 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 VPS41P49754 854 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 DCDC1P59894 354 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 ETF1P62495 437 aaKnown RBP10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 PPARDQ03181 441 aa10.96□□□□□ -0.65
CSPG4P2Y-201ENST00000306853 OLIG2Q13516 323 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms