RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 MLXIPLQ9NP71 852 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 TRPV5Q9NQA5 729 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 GRID1Q9ULK0 1009 aa17.52■□□□□ 0.39
KRT28-201ENST00000306658 A0A0U1RQS6 177 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 FAM95CA0A1B0GW59 222 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 SRRM3A6NNA2 597 aaPredicted RBP17.51■□□□□ 0.39
KRT28-201ENST00000306658 ASMTLO95671 621 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 CYP2A6P11509 494 aaPredicted RBP17.51■□□□□ 0.39
KRT28-201ENST00000306658 HLA-EP13747 358 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 XPAP23025 273 aaPredicted RBP17.51■□□□□ 0.39
KRT28-201ENST00000306658 TNFRSF4P43489 277 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 SOX9P48436 509 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 STC1P52823 247 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 PTPN5P54829 565 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 SLC12A2P55011 1212 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 POU4F1Q01851 419 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 PDE1CQ14123 709 aaPredicted RBP17.51■□□□□ 0.39
KRT28-201ENST00000306658 AARS2Q5JTZ9 985 aaKnown RBP17.51■□□□□ 0.39
KRT28-201ENST00000306658 CNSTQ6PJW8 725 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 LVRNQ6Q4G3 990 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 DSG4Q86SJ6 1040 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 STK40Q8N2I9 435 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 CBARPQ8N350 705 aaPredicted RBP17.51■□□□□ 0.39
KRT28-201ENST00000306658 GPATCH11Q8N954 259 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 CAB39LQ9H9S4 337 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 INTS10Q9NVR2 710 aaKnown RBP17.51■□□□□ 0.39
KRT28-201ENST00000306658 APPL1Q9UKG1 709 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 TLK1Q9UKI8 766 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 CORO1CQ9ULV4 474 aaPredicted RBP17.51■□□□□ 0.39
KRT28-201ENST00000306658 VPS9D1Q9Y2B5 631 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 SLC30A1Q9Y6M5 507 aa17.51■□□□□ 0.39
KRT28-201ENST00000306658 A8MX80 341 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 UPK3BL1B0FP48 263 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 UPK3BL2E5RIL1 263 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 GLRA3O75311 464 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 BMP1P13497 986 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 HNRNPLP14866 589 aaKnown RBP eCLIP17.5■□□□□ 0.39
KRT28-201ENST00000306658 STMN1P16949 149 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 FOXN2P32314 431 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 TTPAP49638 278 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 WDR4P57081 412 aaKnown RBP17.5■□□□□ 0.39
KRT28-201ENST00000306658 ARHGEF7Q14155 803 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 INSCQ1MX18 579 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 TYSND1Q2T9J0 566 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 LRRC66Q68CR7 880 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 RAPH1Q70E73 1250 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 CMC1Q7Z7K0 106 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 TTC7BQ86TV6 843 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 LDB1Q86U70 411 aaPredicted RBP17.5■□□□□ 0.39
KRT28-201ENST00000306658 GDAP1Q8TB36 358 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.5■□□□□ 0.39
KRT28-201ENST00000306658 ELMO2Q96JJ3 720 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 PHF7Q9BWX1 381 aaPredicted RBP17.5■□□□□ 0.39
KRT28-201ENST00000306658 VPS11Q9H270 941 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 CCDC134Q9H6E4 229 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 KCNK12Q9HB15 430 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 LIMD1Q9UGP4 676 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 PLLPQ9Y342 182 aa17.5■□□□□ 0.39
KRT28-201ENST00000306658 TICRRQ7Z2Z1 1910 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 XIRP2A4UGR9 3374 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 A0A096LPK6 155 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 C16orf96A6NNT2 1141 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 KPNA3O00505 521 aaPredicted RBP17.49■□□□□ 0.39
KRT28-201ENST00000306658 EPHX1P07099 455 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 TIMP2P16035 220 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 ZNF30P17039 623 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 SAT1P21673 171 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 CRABP2P29373 138 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 IL12RB1P42701 662 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 XIAPP98170 497 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 CACNG1Q06432 222 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 PEX6Q13608 980 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 ZRANB3Q5FWF4 1079 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 ZNF789Q5FWF6 425 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 RNF187Q5TA31 235 aaPredicted RBP17.49■□□□□ 0.39
KRT28-201ENST00000306658 ZDHHC20Q5W0Z9 365 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 EGFLAMQ63HQ2 1017 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 MICALCLQ6ZW33 695 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 TSPAN33Q86UF1 283 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 SLC44A3Q8N4M1 653 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 CKAP2Q8WWK9 683 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 PBXIP1Q96AQ6 731 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 TSPAN17Q96FV3 270 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 FAM111AQ96PZ2 611 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 CDX2Q99626 313 aaPredicted RBP17.49■□□□□ 0.39
KRT28-201ENST00000306658 FBRSL1Q9HCM7 1045 aaKnown RBP17.49■□□□□ 0.39
KRT28-201ENST00000306658 SLC17A7Q9P2U7 560 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 B4GALT6Q9UBX8 382 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 PPM1HQ9ULR3 514 aa17.49■□□□□ 0.39
KRT28-201ENST00000306658 FNDC3AQ9Y2H6 1198 aaKnown RBP17.49■□□□□ 0.39
KRT28-201ENST00000306658 MUC22E2RYF6 1773 aaPredicted RBP17.49■□□□□ 0.39
KRT28-201ENST00000306658 SPECC1L-ADORA2AF8WAN1 911 aa17.48■□□□□ 0.39
KRT28-201ENST00000306658 NDUFS3O75489 264 aa17.48■□□□□ 0.39
KRT28-201ENST00000306658 C2P06681 752 aa17.48■□□□□ 0.39
KRT28-201ENST00000306658 GSTA1P08263 222 aa17.48■□□□□ 0.39
KRT28-201ENST00000306658 VIPR1P32241 457 aa17.48■□□□□ 0.39
KRT28-201ENST00000306658 PPARGP37231 505 aaPredicted RBP17.48■□□□□ 0.39
KRT28-201ENST00000306658 RAB10P61026 200 aa17.48■□□□□ 0.39
KRT28-201ENST00000306658 SEMA3AQ14563 771 aa17.48■□□□□ 0.39
KRT28-201ENST00000306658 TAF1BQ53T94 588 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms