RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 RARS2Q5T160 578 aaKnown RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 RBM20Q5T481 1227 aaKnown RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 SEL1L3Q68CR1 1132 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 ANKRD34AQ69YU3 496 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 KIAA0930Q6ICG6 404 aaPredicted RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 NIPAL1Q6NVV3 410 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 TMEM26Q6ZUK4 368 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 DENND6AQ8IWF6 608 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 CTAGE3PQ8IX95 158 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 AQP12AQ8IXF9 295 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS50-202ENST00000305866 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS50-202ENST00000305866 ARRDC4Q8NCT1 418 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 HIPK4Q8NE63 616 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SMOQ99835 787 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 FBRSL1Q9HCM7 1045 aaKnown RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 PRDM5Q9NQX1 630 aaPredicted RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 TMEM9Q9P0T7 183 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 MYRFQ9Y2G1 1151 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 HTR3EA5X5Y0 456 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 TMEM247A6NEH6 219 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ARHGAP42A6NI28 874 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 FGF10O15520 208 aaPredicted RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 MAFKO60675 156 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 RECQL4O94761 1208 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 CLIC3O95833 236 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ADRA2AP08913 450 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ZNF24P17028 368 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 PSMC3P17980 439 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 MX2P20592 715 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 FGFR3P22607 806 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 BDNFP23560 247 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 HTR1BP28222 390 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 PTPN6P29350 595 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 SPRP35270 261 aaPredicted RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 SLC1A2P43004 574 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 RGS7P49802 495 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 PSMD7P51665 324 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 CDKN2DP55273 166 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 PPP2R2BQ00005 443 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 GRIK2Q13002 908 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 SELENBP1Q13228 472 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 MPP3Q13368 585 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 FSCBQ5H9T9 825 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ZNF678Q5SXM1 525 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ZNF551Q7Z340 670 aaPredicted RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 TMEM179BQ7Z7N9 219 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 GALNT13Q8IUC8 556 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ZC3H7AQ8IWR0 971 aaKnown RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 MSRB3Q8IXL7 192 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 DEFB106AQ8N104 65 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 C10orf111Q8N326 155 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 KIAA1958Q8N8K9 716 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 PNPLA1Q8N8W4 532 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 SNX31Q8N9S9 440 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 OR52E4Q8NGH9 312 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 OR2T11Q8NH01 316 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 DQX1Q8TE96 717 aaKnown RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 TSPEARQ8WU66 669 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 SLC39A13Q96H72 371 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 COX4I2Q96KJ9 171 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 MRGPRX2Q96LB1 330 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 UROC1Q96N76 676 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 RILPQ96NA2 401 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 SDHCQ99643 169 aaPredicted RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 ACBD6Q9BR61 282 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 TINF2Q9BSI4 451 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ADI1Q9BV57 179 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 LHPPQ9H008 270 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ILKAPQ9H0C8 392 aaPredicted RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 SMOC2Q9H3U7 446 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 CDHR5Q9HBB8 845 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 THG1LQ9NWX6 298 aaKnown RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 SLAMF8Q9P0V8 285 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 GNPTGQ9UJJ9 305 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 GIT1Q9Y2X7 761 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 PTGDR2Q9Y5Y4 395 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ADM5C9JUS6 153 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 M0QX08 132 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 TIPRLO75663 272 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ZNF12P17014 697 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 TYMPP19971 482 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 NDUFV1P49821 464 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 PDAP1Q13442 181 aaKnown RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 RCAN2Q14206 197 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 GRB7Q14451 532 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 SQLEQ14534 574 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 SEMA3AQ14563 771 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 UPP1Q16831 310 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 CDO1Q16878 200 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ANO4Q32M45 955 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 GRAMD1BQ3KR37 738 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 PITRM1Q5JRX3 1037 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 ITPRIPL1Q6GPH6 555 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 PKN3Q6P5Z2 889 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 BLOC1S3Q6QNY0 202 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 XKR5Q6UX68 686 aa5.45□□□□□ -1.54
VPS50-202ENST00000305866 DNAJC14Q6Y2X3 702 aaPredicted RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 PDZD4Q76G19 769 aaPredicted RBP5.45□□□□□ -1.54
VPS50-202ENST00000305866 GPR142Q7Z601 462 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms