RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 TRIM38O00635 465 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 AHCYL1O43865 530 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 SMIM24O75264 130 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 BCAS2O75934 225 aaPredicted RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 FGF1P05230 155 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 ATXN1LP0C7T5 689 aaKnown RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 HNRNPLP14866 589 aaKnown RBP eCLIP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 VCLP18206 1134 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 KCNA5P22460 613 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 BMPR1AP36894 532 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 PSMD8P48556 350 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 GPR15P49685 360 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 IRX1P78414 480 aaPredicted RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 NFKB2Q00653 900 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 RING1Q06587 406 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 SERINC3Q13530 473 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 CLLU1OSQ5K130 101 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 RARS2Q5T160 578 aaKnown RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 RTN4RL1Q86UN2 441 aaPredicted RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 ST13P4Q8IZP2 240 aaPredicted RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 L3HYPDHQ96EM0 354 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 LRGUKQ96M69 825 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 ZNF599Q96NL3 588 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 Q9H521 79 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 RETREG1Q9H6L5 497 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 POPDC3Q9HBV1 291 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 SPTBN5Q9NRC6 3674 aaKnown RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 UBDO15205 165 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 B4GALT3O60512 393 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 GPC4O75487 556 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 GLP2RO95838 553 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 IGLV3-27P01718 113 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 FESP07332 822 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 XRCC1P18887 633 aaPredicted RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 COL9A1P20849 921 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 ATP4BP51164 291 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 CLCN2P51788 898 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 AQP4P55087 323 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 USP46P62068 366 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 CEACAM7Q14002 265 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 LRRC36Q1X8D7 754 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 GRAMD1BQ3KR37 738 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 MMEL1Q495T6 779 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 CTXN3Q4LDR2 81 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 RAP1GAP2Q684P5 730 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 ZNF280DQ6N043 979 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 MRNIPQ6NTE8 343 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 FAM43BQ6ZT52 329 aaPredicted RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 IGSF8Q969P0 613 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 ZNF689Q96CS4 500 aaPredicted RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 LMAN2LQ9H0V9 348 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 NSUN3Q9H649 340 aaKnown RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 CYP4F12Q9HCS2 524 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 EPS15L1Q9UBC2 864 aa14.2□□□□□ -0.14
RAB40A-201ENST00000304236 MRPL42Q9Y6G3 142 aaKnown RBP14.2□□□□□ -0.14
RAB40A-201ENST00000304236 SLC12A8A0AV02 714 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 LDB2O43679 373 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 PRAMEF11O60813 436 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 RNASEH1O60930 286 aaKnown RBP14.19□□□□□ -0.14
RAB40A-201ENST00000304236 CD1EP15812 388 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 SMARCB1Q12824 385 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 MRPL58Q14197 206 aaKnown RBP14.19□□□□□ -0.14
RAB40A-201ENST00000304236 C10orf120Q5SQS8 335 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 NPAS4Q8IUM7 802 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 BBS5Q8N3I7 341 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 ADCY4Q8NFM4 1077 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 CLP1Q92989 425 aaKnown RBP14.19□□□□□ -0.14
RAB40A-201ENST00000304236 SPATA17Q96L03 361 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 MARK4Q96L34 752 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 RPRD1AQ96P16 312 aaPredicted RBP14.19□□□□□ -0.14
RAB40A-201ENST00000304236 TUBGCP5Q96RT8 1024 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 RC3H2Q9HBD1 1191 aaKnown RBP14.19□□□□□ -0.14
RAB40A-201ENST00000304236 SARDHQ9UL12 918 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 PRG3Q9Y2Y8 225 aaPredicted RBP14.19□□□□□ -0.14
RAB40A-201ENST00000304236 TRAF6Q9Y4K3 522 aa14.19□□□□□ -0.14
RAB40A-201ENST00000304236 NCOR1O75376 2440 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 PSMD12O00232 456 aaPredicted RBP14.18□□□□□ -0.14
RAB40A-201ENST00000304236 ZCCHC18P0CG32 403 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 OGNP20774 298 aaKnown RBP14.18□□□□□ -0.14
RAB40A-201ENST00000304236 FDXRP22570 491 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 ARSDP51689 593 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 PSME3P61289 254 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 PTK2BQ14289 1009 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 ZNF235Q14590 738 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 PUS10Q3MIT2 529 aaKnown RBP14.18□□□□□ -0.14
RAB40A-201ENST00000304236 TCEAL5Q5H9L2 206 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 RNF220Q5VTB9 566 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 RAB44Q7Z6P3 723 aaPredicted RBP14.18□□□□□ -0.14
RAB40A-201ENST00000304236 ISCA2Q86U28 154 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 PGBD5Q8N414 524 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 ANKRD49Q8WVL7 239 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 LINC01599Q8WXQ3 324 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 TMA16Q96EY4 203 aaKnown RBP14.18□□□□□ -0.14
RAB40A-201ENST00000304236 NPAS2Q99743 824 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 SEMA3CQ99985 751 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 CENPKQ9BS16 269 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 GSTO2Q9H4Y5 243 aa14.18□□□□□ -0.14
RAB40A-201ENST00000304236 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.18□□□□□ -0.14
RAB40A-201ENST00000304236 SUCOQ9UBS9 1254 aaKnown RBP14.18□□□□□ -0.14
RAB40A-201ENST00000304236 CD3EAPO15446 510 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms