RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 DAGLBQ8NCG7 672 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 DNASE1L2Q92874 299 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 FUCA2Q9BTY2 467 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 ULBP1Q9BZM6 244 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 LRMDAQ9H2I8 198 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 ELOVL2Q9NXB9 296 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 ATPIF1Q9UII2 106 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 ZMYM2Q9UBW7 1377 aa10.39□□□□□ -0.75
CLIP1-201ENST00000302528 KIDINS220Q9ULH0 1771 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 AP5Z1O43299 807 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ADAM8P78325 824 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 PPATQ06203 517 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ATXN7L2Q5T6C5 722 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 UNC5AQ6ZN44 842 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 LENG1Q96BZ8 264 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 MCCC2Q9HCC0 563 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 CDH7Q9ULB5 785 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 NFASCO94856 1347 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ADGRL3Q9HAR2 1447 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 UGT2B11O75310 529 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 BPNT1O95861 308 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 LINC00032P0C843 101 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 MECP2P51608 486 aaKnown RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 FIGNQ5HY92 759 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF697Q5TEC3 545 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 LCN1P1Q5VSP4 162 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 DENND6BQ8NEG7 585 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 PHF12Q96QT6 1004 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 STOX2Q9P2F5 926 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 MTRRQ9UBK8 725 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 DEPDC5O75140 1603 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 RIIAD1A6NNX1 92 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 MID1O15344 667 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 REM1O75628 298 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF844Q08AG5 666 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 OGFRL1Q5TC84 451 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 SLC30A6Q6NXT4 461 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 DNAAF5Q86Y56 855 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 C4orf19Q8IY42 314 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ZCCHC9Q8N567 271 aaKnown RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 NKD1Q969G9 470 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 BORCS5Q969J3 196 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 VCPIP1Q96JH7 1222 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 AIF1LQ9BQI0 150 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 GULP1Q9UBP9 304 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ADAM28Q9UKQ2 775 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 PCDHGB5Q9Y5G0 923 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 UMODL1Q5DID0 1318 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 AKAP3O75969 853 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 RARAP10276 462 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 SRCP12931 536 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 LAMP2P13473 410 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 GDI2P50395 445 aaKnown RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 SP140Q13342 867 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 CBX2Q14781 532 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ABCA11PQ4W5N1 156 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 SPDYCQ5MJ68 293 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 CWF19L1Q69YN2 538 aaKnown RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 MOXD1Q6UVY6 613 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ANKFN1Q8N957 763 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ATG10Q9H0Y0 220 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 IMP3Q9NV31 184 aaKnown RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 SEC14L3Q9UDX4 400 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 OR12D3Q9UGF7 316 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 DNMT3LQ9UJW3 386 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 SNX7Q9UNH6 387 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 PPLO60437 1756 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ZSCAN5BA6NJL1 495 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 CPSF4LA6NMK7 179 aaKnown RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 L7N2F9 121 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 TBL1XO60907 577 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 PAEPP09466 180 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 HSD3B1P14060 373 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ANPEPP15144 967 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ATF4P18848 351 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 AXLP30530 894 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 CAP2P40123 477 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 SOX10P56693 466 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 VAMP2P63027 116 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ELF3P78545 371 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ZNF155Q12901 538 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 HECTD3Q5T447 861 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 CRTC3Q6UUV7 619 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 MINDY2Q8NBR6 621 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 JSRP1Q96MG2 331 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 AARSD1Q9BTE6 412 aaKnown RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ACAT2Q9BWD1 397 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ASB7Q9H672 318 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 ASAH2Q9NR71 780 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 MSRAQ9UJ68 235 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 MRPS23Q9Y3D9 190 aaKnown RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 POLR3HQ9Y535 204 aaPredicted RBP10.38□□□□□ -0.75
CLIP1-201ENST00000302528 PCDHB9Q9Y5E1 797 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 SHPRHQ149N8 1683 aa10.38□□□□□ -0.75
CLIP1-201ENST00000302528 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 PLK4O00444 970 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 PGAM2P15259 253 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 CHKAP35790 457 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 MADCAM1Q13477 382 aa10.37□□□□□ -0.75
CLIP1-201ENST00000302528 MFSD10Q14728 455 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms