RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 MATN3O15232 486 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 PAMP19021 973 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 EEF1B2P24534 225 aaKnown RBP13.54□□□□□ -0.24
CTTN-201ENST00000301843 ADSLP30566 484 aaPredicted RBP13.54□□□□□ -0.24
CTTN-201ENST00000301843 GPR15P49685 360 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 GEMP55040 296 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 NAA20P61599 178 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 CDC42EP1Q00587 391 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 SEMA3AQ14563 771 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 TBPL2Q6SJ96 375 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 TRIM74Q86UV6 250 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 TRIM73Q86UV7 250 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 OR10T2Q8NGX3 314 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 PSMG2Q969U7 264 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 SLC10A4Q96EP9 437 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 HMCESQ96FZ2 354 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 SMARCD1Q96GM5 515 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 TINF2Q9BSI4 451 aa13.54□□□□□ -0.24
CTTN-201ENST00000301843 ARPC2O15144 300 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 SLC22A2O15244 555 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 CCNCP24863 283 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 HCAR3P49019 387 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 AGTR2P50052 363 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 PIGFQ07326 219 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 USP41Q3LFD5 358 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 ALFQ53S48 1182 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 TMEM214Q6NUQ4 689 aaKnown RBP13.53□□□□□ -0.24
CTTN-201ENST00000301843 ELMSAN1Q6PJG2 1045 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 ERMP1Q7Z2K6 904 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 LIMS2Q7Z4I7 341 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 GPR142Q7Z601 462 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 ERI1Q8IV48 349 aaKnown RBP13.53□□□□□ -0.24
CTTN-201ENST00000301843 IL12RB2Q99665 862 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 ARMC7Q9H6L4 198 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 UXTQ9UBK9 157 aaPredicted RBP13.53□□□□□ -0.24
CTTN-201ENST00000301843 IKZF3Q9UKT9 509 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 FXYD1O00168 92 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 CLOCKO15516 846 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 ELK4P28324 431 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 TNK2Q07912 1038 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 FRG1Q14331 258 aaKnown RBP13.53□□□□□ -0.24
CTTN-201ENST00000301843 MAPRE2Q15555 327 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 ANKRD34AQ69YU3 496 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 ZNF549Q6P9A3 640 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 CILP2Q8IUL8 1156 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 CDK15Q96Q40 435 aa13.53□□□□□ -0.24
CTTN-201ENST00000301843 KCNH1O95259 989 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 F9P00740 461 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 GRIK1P39086 918 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 SERPINH1P50454 418 aaKnown RBP13.52□□□□□ -0.24
CTTN-201ENST00000301843 MERTKQ12866 999 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.241e-13■■■■■ 29.1
CTTN-201ENST00000301843 CCL14Q16627 93 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 RAB41Q5JT25 222 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 PAGE3Q5JUK9 113 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 KIAA0930Q6ICG6 404 aaPredicted RBP13.52□□□□□ -0.24
CTTN-201ENST00000301843 MIB1Q86YT6 1006 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 TMEM126BQ8IUX1 230 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 AFAP1L2Q8N4X5 818 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 EXOC2Q96KP1 924 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 ANKRD60Q9BZ19 345 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 CXorf21Q9HAI6 301 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 ENTPD7Q9NQZ7 604 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 INTS7Q9NVH2 962 aaKnown RBP13.52□□□□□ -0.24
CTTN-201ENST00000301843 OSER1Q9NX31 292 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 RAD54BQ9Y620 910 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 HS3ST4Q9Y661 456 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 SMIM35A0A1B0GVV1 85 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 BTBD19C9JJ37 291 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 E9PAM4 449 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 CRCPO75575 148 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 SOAT2O75908 522 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 CAPNS1P04632 268 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 THP07101 528 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 HSPA8P11142 646 aaKnown RBP13.52□□□□□ -0.24
CTTN-201ENST00000301843 IMPDH1P20839 514 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 SLC6A2P23975 617 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 VARSP26640 1264 aaKnown RBP13.52□□□□□ -0.24
CTTN-201ENST00000301843 IST1P53990 364 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 ATP1A4Q13733 1029 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 TIGD2Q4W5G0 525 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 IQSEC1Q6DN90 963 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 PPP4R4Q6NUP7 873 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 TLK2Q86UE8 772 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 PARP8Q8N3A8 854 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 ABHD16BQ9H3Z7 469 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 NOL6Q9H6R4 1146 aaKnown RBP13.52□□□□□ -0.24
CTTN-201ENST00000301843 TIMMDC1Q9NPL8 285 aa13.52□□□□□ -0.24
CTTN-201ENST00000301843 NYNRINQ9P2P1 1898 aaKnown RBP13.52□□□□□ -0.25
CTTN-201ENST00000301843 ARL5CA6NH57 179 aa13.52□□□□□ -0.25
CTTN-201ENST00000301843 SUPT3HB4E1H0 165 aa13.52□□□□□ -0.25
CTTN-201ENST00000301843 GPR39O43194 453 aa13.52□□□□□ -0.25
CTTN-201ENST00000301843 ATP6V1G1O75348 118 aa13.52□□□□□ -0.25
CTTN-201ENST00000301843 POLR2IP36954 125 aaKnown RBP13.52□□□□□ -0.25
CTTN-201ENST00000301843 DNAJB13P59910 316 aa13.52□□□□□ -0.25
CTTN-201ENST00000301843 NFYCQ13952 458 aa13.52□□□□□ -0.25
CTTN-201ENST00000301843 AARS2Q5JTZ9 985 aaKnown RBP13.52□□□□□ -0.25
CTTN-201ENST00000301843 GIPC3Q8TF64 312 aa13.52□□□□□ -0.25
CTTN-201ENST00000301843 THAP11Q96EK4 314 aa13.52□□□□□ -0.25
CTTN-201ENST00000301843 UBXN10Q96LJ8 280 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms