RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CRTC3Q6UUV7 619 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 TSEN15Q8WW01 171 aaKnown RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 S100PBPQ96BU1 408 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 MSANTD3Q96H12 275 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ABCC13Q9NSE7 274 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 UPB1Q9UBR1 384 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 MAGEB3O15480 346 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 MPZL2O60487 215 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 METTL18O95568 372 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ZSCAN5DPP0CG00 497 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 IST1P53990 364 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 MECRQ9BV79 373 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 IGFLR1Q9H665 355 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 POPDC2Q9HBU9 364 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PRDM8Q9NQV8 689 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 OR12D3Q9UGF7 316 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ADAM28Q9UKQ2 775 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 SALL1Q9NSC2 1324 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PLIN3O60664 434 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 LRIG2O94898 1065 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 CAP2P40123 477 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 OR8H3Q8N146 312 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ARRDC4Q8NCT1 418 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 RCN3Q96D15 328 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 OMDQ99983 421 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 TTLL2Q9BWV7 592 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PDGFDQ9GZP0 370 aaPredicted RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 C3orf18Q9UK00 162 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 TBC1D30Q9Y2I9 924 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 USP20Q9Y2K6 914 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 OR10H1Q9Y4A9 318 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 FAM172BPA6NC97 362 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 BUD23O43709 281 aaKnown RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 NTSR2O95665 410 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 TRUB2O95900 331 aaKnown RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PAEPP09466 180 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 LDLRAP1Q5SW96 308 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 RETSATQ6NUM9 610 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 NIPAL1Q6NVV3 410 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 MOXD1Q6UVY6 613 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PAGE2Q7Z2X7 111 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 RASAL3Q86YV0 1011 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 CHERPQ8IWX8 916 aaKnown RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 OR52K1Q8NGK4 314 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 TRNT1Q96Q11 434 aaKnown RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 FAIM2Q9BWQ8 316 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 MROH8Q9H579 483 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 EGFL7Q9UHF1 273 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ABL2P42684 1182 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 TROAPQ12815 778 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 LCN1P1Q5VSP4 162 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 SLC27A1Q6PCB7 646 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 C4orf19Q8IY42 314 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PTGR2Q8N8N7 351 aaPredicted RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PCSK9Q8NBP7 692 aaKnown RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 TSEN2Q8NCE0 465 aaKnown RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 SETD6Q8TBK2 473 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 TRAPPC12Q8WVT3 735 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PMM1Q92871 262 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 LENG9Q96B70 501 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 MED28Q9H204 178 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 A0A0A0MRY4 1105 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 NPEPPSL1A6NEC2 478 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 H7C2Y5 167 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 SUV39H1O43463 412 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 NRP2O60462 931 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PEX11AO75192 247 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 LYPLA1O75608 230 aaPredicted RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 CSF1RP07333 972 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 LYNP07948 512 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 TFEBP19484 476 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 NFE2Q16621 373 aaPredicted RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 RAET1GQ6H3X3 334 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 SCIMPQ6UWF3 145 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 SLC30A10Q6XR72 485 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 GPRIN3Q6ZVF9 776 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 FAM183BPQ6ZVS7 135 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ARCQ7LC44 396 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ILDR1Q86SU0 546 aaPredicted RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PSTKQ8IV42 348 aaKnown RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 SLC34A3Q8N130 599 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 CLIP4Q8N3C7 705 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PACRGLQ8N7B6 248 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 C18orf25Q96B23 403 aaPredicted RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ZDHHC15Q96MV8 337 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 SPATA13Q96N96 652 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PANX1Q96RD7 426 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 AIFM2Q9BRQ8 373 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 CDH19Q9H159 772 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 EHD4Q9H223 541 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 PAK6Q9NQU5 681 aaPredicted RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 AP5Z1O43299 807 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 UGT2B11O75310 529 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 CCNKO75909 580 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ANXA5P08758 320 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ATF4P18848 351 aaPredicted RBP5.56□□□□□ -1.52
CPSF2-201ENST00000298875 HSPA14Q0VDF9 509 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ADGRG2Q8IZP9 1017 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 LZTR1Q8N653 840 aa5.56□□□□□ -1.52
CPSF2-201ENST00000298875 ZFP28Q8NHY6 868 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms