RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 MREGQ8N565 214 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 POF1BQ8WVV4 589 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 ARHGAP39Q9C0H5 1083 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 ADGRA3Q8IWK6 1321 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 LCA5LO95447 670 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 NUDT17P0C025 328 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 HGFP14210 728 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 EPORP19235 508 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 POMGNT2Q8NAT1 580 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 ZNF516Q92618 1163 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 TBATAQ96M53 351 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 COG5Q9UP83 839 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 LDLRP01130 860 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 RABGGTBP53611 331 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 NDUFA9Q16795 377 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 C2orf27AQ580R0 203 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 KIAA0408Q6ZU52 694 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 VN1R5Q7Z5H4 357 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 ZNF567Q8N184 647 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 POU5F2Q8N7G0 328 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 SRFBP1Q8NEF9 429 aaKnown RBP17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 BPIFB1Q8TDL5 484 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 LPIN3Q9BQK8 851 aa17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 R3HDM2Q9Y2K5 976 aaKnown RBP17.69■□□□□ 0.42
CDC42EP3-201ENST00000295324 ENPP3O14638 875 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 HDAC3O15379 428 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 RECQL5O94762 991 aaPredicted RBP17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 COL6A2P12110 1019 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 DSG1Q02413 1049 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 NCF4Q15080 339 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 ALG11Q2TAA5 492 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 LSM12Q3MHD2 195 aaKnown RBP17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 CARD16Q5EG05 197 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 HECTD2Q5U5R9 776 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 HDDC3Q8N4P3 179 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 DPEP2Q9H4A9 486 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 TDP1Q9NUW8 608 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 LEF1Q9UJU2 399 aaPredicted RBP17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 CORO2BQ9UQ03 480 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 ZNF780BQ9Y6R6 833 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 LRP6O75581 1613 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 ADH5P11766 374 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 CHRNB2P17787 502 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 ITGAXP20702 1163 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 SSR2P43308 183 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 SCTRP47872 440 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 CASP12Q6UXS9 341 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 UTP15Q8TED0 518 aaKnown RBP17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 SLC4A5Q9BY07 1137 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 TMEM245Q9H330 911 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 PCDH12Q9NPG4 1184 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 DNAJC11Q9NVH1 559 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 DZANK1Q9NVP4 752 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 TCAF1Q9Y4C2 921 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 SNX10Q9Y5X0 201 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 INPPL1O15357 1258 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 GABRB2P47870 512 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 ECT2LQ008S8 904 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 BIKQ13323 160 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 SQLEQ14534 574 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 TXNDC8Q6A555 127 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 C16orf62Q7Z3J2 963 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 SDCBP2Q9H190 292 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 GKN1Q9NS71 199 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 ATP6V1HQ9UI12 483 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 RHPN2P1A8MT19 583 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 CNOT3O75175 753 aaKnown RBP17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 SLC35G1Q2M3R5 365 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 ABCG8Q9H221 673 aa17.68■□□□□ 0.42
CDC42EP3-201ENST00000295324 TBX18O95935 607 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 LRPAP1P30533 357 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 LUZP2Q86TE4 346 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 GPR180Q86V85 440 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 ITFG1Q8TB96 612 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 CKAP2Q8WWK9 683 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 PWWP2AQ96N64 755 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 TCF12Q99081 682 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 C16orf70Q9BSU1 422 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 TBCDQ9BTW9 1192 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 TRIT1Q9H3H1 467 aaKnown RBP17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 CHRAC1Q9NRG0 131 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 TBC1D23Q9NUY8 699 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 INSL5Q9Y5Q6 135 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 CSKP41240 450 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 DGKEP52429 567 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 RPS24P62847 133 aaKnown RBP17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 PRKG2Q13237 762 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 SPATA22Q8NHS9 363 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 ELOVL2Q9NXB9 296 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 CORO1CQ9ULV4 474 aaPredicted RBP17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 TRBV23OR9-2A0A075B6M9 112 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 SHBGP04278 402 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 UNGP13051 313 aaPredicted RBP17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 PSMC3P17980 439 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 BRSK1Q8TDC3 778 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 RNF145Q96MT1 663 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 ZNF599Q96NL3 588 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 CACNG4Q9UBN1 327 aa17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 PAIP2BQ9ULR5 123 aaKnown RBP17.67■□□□□ 0.42
CDC42EP3-201ENST00000295324 MBLAC2Q68D91 279 aa17.67■□□□□ 0.42
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