RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 HLA-DPA1P20036 260 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 IMPDH1P20839 514 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 CCL23P55773 120 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 OXCT1P55809 520 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 PSME3P61289 254 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 SH3BP2P78314 561 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 ECT2LQ008S8 904 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 MED21Q13503 144 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 SLC22A9Q8IVM8 553 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 DCBLD1Q8N8Z6 715 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 ICA1LQ8NDH6 482 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 FBXO22Q8NEZ5 403 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 BRSK1Q8TDC3 778 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 CDKN2AIPNLQ96HQ2 116 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 FEM1CQ96JP0 617 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 MAELQ96JY0 434 aaKnown RBP15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 CCDC68Q9H2F9 335 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 GMPR2Q9P2T1 348 aaKnown RBP15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 UBA2Q9UBT2 640 aaPredicted RBP15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 DNMT3LQ9UJW3 386 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 DNAJA2O60884 412 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 GALTP07902 379 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 DNAJB1P25685 340 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 SOX11P35716 441 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 YBEYP58557 167 aaPredicted RBP15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 TAF12Q16514 161 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 PAQR3Q6TCH7 311 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 DEFB128Q7Z7B8 93 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 KLHL32Q96NJ5 620 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 VCX3BQ9H321 246 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 SEMA4BQ9NPR2 832 aaPredicted RBP15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 THSD7BQ9C0I4 1608 aa15.79■□□□□ 0.12
NCKIPSD-201ENST00000294129 AHCYL1O43865 530 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 SRP72O76094 671 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 INHAP05111 366 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 ZNF37AP17032 561 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 MAPKAPK2P49137 400 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 TIAL1Q01085 375 aaKnown RBP eCLIP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 REP15Q6BDI9 236 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 KIAA1841Q6NSI8 718 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 SCIMPQ6UWF3 145 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 ADGRG6Q86SQ4 1221 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 PELI3Q8N2H9 469 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 BBS5Q8N3I7 341 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 PAF1Q8N7H5 531 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 C19orf60Q96EN9 201 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 MUC3BQ9H195 1237 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 SEMA6AQ9H2E6 1030 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 PSMD13Q9UNM6 376 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 A0A1B0GTL3 188 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 PQBP1O60828 265 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 NDST3O95803 873 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 KLKB1P03952 638 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 RHOCP08134 193 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 VCLP18206 1134 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 CORO1AP31146 461 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 ARL1P40616 181 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 SLC11A2P49281 568 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 POLE2P56282 527 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 GPNMBQ14956 572 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 WBP2Q969T9 261 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 PRICKLE1Q96MT3 831 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 MEAF6Q9HAF1 191 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 PDFQ9HBH1 243 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 SCUBE2Q9NQ36 999 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 POLR3BQ9NW08 1133 aaPredicted RBP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 UTP6Q9NYH9 597 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 GALPQ9UBC7 116 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 ASB3Q9Y575 518 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 MOXD2PA6NHM9 499 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 FBP2O00757 339 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 NDUFS3O75489 264 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 FDXRP22570 491 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 HERVK_113P63132 956 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 TSNQ15631 228 aaKnown RBP15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 C11orf91Q3C1V1 193 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 ATP6V1E2Q96A05 226 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 GBP5Q96PP8 586 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 ERVK-6Q9BXR3 956 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 SEPT3Q9UH03 358 aa15.78■□□□□ 0.12
NCKIPSD-201ENST00000294129 NR5A2O00482 541 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 COCHO43405 550 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 OR1I1O60431 355 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 SNAP91O60641 907 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 CRCPO75575 148 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 CSPG5O95196 566 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 LINC00032P0C843 101 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 STC1P52823 247 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 ATN1P54259 1190 aaPredicted RBP15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 PLD1Q13393 1074 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 FOXB2Q5VYV0 432 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 FAM117BQ6P1L5 589 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 FBXL19Q6PCT2 694 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 CYHR1Q6ZMK1 362 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 MDGA1Q8NFP4 955 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 DCUN1D1Q96GG9 259 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 TRIM8Q9BZR9 551 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 CACNA2D2Q9NY47 1150 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 IKZF3Q9UKT9 509 aa15.77■□□□□ 0.12
NCKIPSD-201ENST00000294129 RNF112Q9ULX5 631 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms