RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PDP1Q9P0J1 537 aaPredicted RBP15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 VPS4AQ9UN37 437 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 ERGIC3Q9Y282 383 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 NKRFO15226 690 aaKnown RBP eCLIP15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 IPO13O94829 963 aaKnown RBP15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 DDNO94850 711 aaPredicted RBP15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 AMHP03971 560 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 CSH1P0DML2 217 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 CSH2P0DML3 217 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 UBR7Q8N806 425 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 CDCA5Q96FF9 252 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 SDCBP2Q9H190 292 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 LHX5Q9H2C1 402 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 KNDC1Q76NI1 1749 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 IQCMA0A1B0GVH7 501 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 PAGE1O75459 146 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 TTPAP49638 278 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 AKR1D1P51857 326 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 SLC25A52Q3SY17 297 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 ZNF572Q7Z3I7 529 aaPredicted RBP15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 TFAP2BQ92481 460 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 QKIQ96PU8 341 aaKnown RBP eCLIP15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 CCDC3Q9BQI4 270 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 POMPQ9Y244 141 aa15.33■□□□□ 0.04
SHROOM4-201ENST00000289292 NOBOXO60393 691 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 PEX10O60683 326 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 OTCP00480 354 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 SETMARQ53H47 684 aaPredicted RBP15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 CPSF7Q8N684 471 aaKnown RBP15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 MRPL48Q96GC5 212 aaKnown RBP15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 TPK1Q9H3S4 243 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 APOBEC3GQ9HC16 384 aaKnown RBP15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 BCKDKO14874 412 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 TNNI3P19429 210 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 CYP4F8P98187 520 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 FSTL4Q6MZW2 842 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 C12orf56Q8IXR9 622 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 TBC1D21Q8IYX1 336 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 HOPXQ9BPY8 73 aaPredicted RBP15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 DUSP16Q9BY84 665 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 ZNF395Q9H8N7 513 aaPredicted RBP15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 CHRNGP07510 517 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 USP45Q70EL2 814 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 AADATQ8N5Z0 425 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 PCDHAC1Q9H158 963 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 ZNF221Q9UK13 617 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 C5orf60A6NFR6 353 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 ITGAXP20702 1163 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 LIPEQ05469 1076 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 C9orf57Q5W0N0 161 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 PIH1D2Q8WWB5 315 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 TAS2R1Q9NYW7 299 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 MAGEL2Q9UJ55 1249 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 ZNF490Q9ULM2 529 aaPredicted RBP15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 MST1RQ04912 1400 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 NDUFB5O43674 189 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 ADGRE1Q14246 886 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 VANGL1Q8TAA9 524 aaPredicted RBP15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 NLNQ9BYT8 704 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 PRDM16Q9HAZ2 1276 aa15.32■□□□□ 0.04
SHROOM4-201ENST00000289292 C9P02748 559 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 CXCR3P49682 368 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 ASTE1Q2TB18 679 aaPredicted RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 ZFP69Q49AA0 526 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 PMF1Q6P1K2 205 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 GPR180Q86V85 440 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 UBE2J2Q8N2K1 259 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 PIK3C3Q8NEB9 887 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 FCRL2Q96LA5 508 aaPredicted RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 TOR3AQ9H497 397 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 KPNA3O00505 521 aaPredicted RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 KHDRBS3O75525 346 aaKnown RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 IGFBP5P24593 272 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 IFNGR2P38484 337 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 CCR4P51679 360 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 POU5F1Q01860 360 aaKnown RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 RASAL3Q86YV0 1011 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 SLC34A3Q8N130 599 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 ZNF567Q8N184 647 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 DKK3Q9UBP4 350 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 NEURL4Q96JN8 1562 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 BBIP1A8MTZ0 92 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 FESP07332 822 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 CFHP08603 1231 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 WARSP23381 471 aaKnown RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 TRAP1Q12931 704 aaKnown RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 DENND6AQ8IWF6 608 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 LENG9Q96B70 501 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 TSSK3Q96PN8 268 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 KCNS3Q9BQ31 491 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 ZNF358Q9NW07 568 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 PPM1HQ9ULR3 514 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 COQ6Q9Y2Z9 468 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 TRAFD1O14545 582 aaPredicted RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 MDM4O15151 490 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 FARP2O94887 1054 aaPredicted RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 ARF4P18085 180 aaPredicted RBP15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 FECHP22830 423 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 RAB27AP51159 221 aa15.31■□□□□ 0.04
SHROOM4-201ENST00000289292 FCHO2Q0JRZ9 810 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms