RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 FGF19O95750 216 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 JMJD7P0C870 316 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 HAPLN1P10915 354 aaPredicted RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 RPL14P50914 215 aaKnown RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 SH3BGRP55822 239 aaPredicted RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 CAP1Q01518 475 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 RBBP7Q16576 425 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 ZRANB3Q5FWF4 1079 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 C16orf46Q6P387 395 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 IYDQ6PHW0 289 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 GLT6D1Q7Z4J2 308 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 CLNKQ7Z7G1 428 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 SCUBE1Q8IWY4 988 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 LIX1Q8N485 282 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 TSTD1Q8NFU3 115 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 OR10T2Q8NGX3 314 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 REXO4Q9GZR2 422 aaKnown RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 RIC8BQ9NVN3 520 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 TMEM248Q9NWD8 314 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 USP3Q9Y6I4 520 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 H0Y3Z8 333 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 PIAS1O75925 651 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 FAM155BO75949 473 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 NDST3O95803 873 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 KRT16P08779 473 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 NRLP54845 237 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 CAMK1Q14012 370 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 LRRC32Q14392 662 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 CNGA3Q16281 694 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 C11orf88Q6PI97 169 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 OTOP3Q7RTS5 596 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 UMODL1-AS1Q8N2C9 162 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 FITM2Q8N6M3 262 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 KHSRPQ92945 711 aaKnown RBP eCLIP6.93□□□□□ -1.31e-6■■■■□ 23
VPS8-201ENST00000287546 FEM1CQ96JP0 617 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 KIFC1Q9BW19 673 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 RHOBTB2Q9BYZ6 727 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 EFCAB1Q9HAE3 211 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 BATF3Q9NR55 127 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 CHRAC1Q9NRG0 131 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 GID8Q9NWU2 228 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 PHF24Q9UPV7 400 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 DMTF1Q9Y222 760 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 ASB3Q9Y575 518 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 RBM7Q9Y580 266 aaKnown RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 HS3ST4Q9Y661 456 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 MEIS3P2A8K0S8 358 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 F8W810 466 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 HDAC3O15379 428 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 IGSF6O95976 241 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 SOAT1P35610 550 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 GLRBP48167 497 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 GNA12Q03113 381 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 CDC16Q13042 620 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 CBFBQ13951 182 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 CNKSR3Q6P9H4 555 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 PAQR9Q6ZVX9 377 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 LIMS2Q7Z4I7 341 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 NKAPQ8N5F7 415 aaKnown RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 AGR3Q8TD06 166 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 STYXQ8WUJ0 223 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 C10orf82Q8WW14 230 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 SMG7Q92540 1137 aaKnown RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 MFSD3Q96ES6 412 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 C11orf84Q9BUA3 381 aaPredicted RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 PTPRZ1P23471 2315 aaPredicted RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 E2F8A0AVK6 867 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 MTMR11A4FU01 709 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 ENPP3O14638 875 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 SUPT7LO94864 414 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 PAPSS2O95340 614 aaPredicted RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 TTPAP49638 278 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 DGKEP52429 567 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 SELENOVP59797 346 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 GRSF1Q12849 480 aaKnown RBP eCLIP6.93□□□□□ -1.3
VPS8-201ENST00000287546 BIKQ13323 160 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 TSTD2Q5T7W7 516 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 FSTL4Q6MZW2 842 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 GPRIN1Q7Z2K8 1008 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 PACS2Q86VP3 889 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 IGDCC3Q8IVU1 814 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 DENND6AQ8IWF6 608 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 MPP5Q8N3R9 675 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 ZMIZ2Q8NF64 920 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 PEX13Q92968 403 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 DNAJC28Q9NX36 388 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.93□□□□□ -1.3
VPS8-201ENST00000287546 SIP14410 1827 aa6.93□□□□□ -1.3
VPS8-201ENST00000287546 CDC25CP30307 473 aa6.92□□□□□ -1.3
VPS8-201ENST00000287546 ADSLP30566 484 aaPredicted RBP6.92□□□□□ -1.3
VPS8-201ENST00000287546 ARRB1P49407 418 aaPredicted RBP6.92□□□□□ -1.3
VPS8-201ENST00000287546 PITX1P78337 314 aaPredicted RBP6.92□□□□□ -1.3
VPS8-201ENST00000287546 ANGPT1Q15389 498 aa6.92□□□□□ -1.3
VPS8-201ENST00000287546 TRIM68Q6AZZ1 485 aa6.92□□□□□ -1.3
VPS8-201ENST00000287546 ZCCHC23Q6ZST2 131 aa6.92□□□□□ -1.3
VPS8-201ENST00000287546 TMEM135Q86UB9 458 aa6.92□□□□□ -1.3
VPS8-201ENST00000287546 LPCAT1Q8NF37 534 aa6.92□□□□□ -1.3
VPS8-201ENST00000287546 CXorf40AQ8TE69 158 aa6.92□□□□□ -1.3
VPS8-201ENST00000287546 TCF12Q99081 682 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms