RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 ACVR1CQ8NER5 493 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 UCMAQ8WVF2 138 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 SLCO2A1Q92959 643 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 CMTM5Q96DZ9 223 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 HIST1H2AHQ96KK5 128 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 CCDC138Q96M89 665 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 MYCBPQ99417 103 aaPredicted RBP9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 HIST1H2AJQ99878 128 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 H2AFJQ9BTM1 129 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 IGSF9Q9P2J2 1179 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 TRMT6Q9UJA5 497 aaKnown RBP9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 AURKCQ9UQB9 309 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 INVSQ9Y283 1065 aa9.04□□□□□ -0.96
CCDC144B-201ENST00000285176 E2F6O75461 281 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 PRAMEF1O95521 474 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 NDST3O95803 873 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 OAS1P00973 400 aaKnown RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 TPSB2P20231 275 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 DHCR24Q15392 516 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 TPSAB1Q15661 275 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 SPANXN3Q5MJ09 141 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 CYB5D1Q6P9G0 228 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 CDHR3Q6ZTQ4 885 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 OR4L1Q8NH43 312 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 SLC44A1Q8WWI5 657 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 NXNL1Q96CM4 212 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 MRPL1Q9BYD6 325 aaKnown RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 OSBPL6Q9BZF3 934 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 IL1RL2Q9HB29 575 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 ILVBLA1L0T0 632 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 HNRNPH1P31943 449 aaKnown RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 TAS2R39P59534 338 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 CDK16Q00536 496 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 DLX2Q07687 328 aaPredicted RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 USP4Q13107 963 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 PFKFB4Q16877 469 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 DNAL1Q4LDG9 190 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 FAM78AQ5JUQ0 283 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 PDPK2PQ6A1A2 396 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 SFTPA1Q8IWL2 248 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 PGBD5Q8N414 524 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 PGAP3Q96FM1 320 aaPredicted RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 ZNF419Q96HQ0 510 aaPredicted RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 FCRL5Q96RD9 977 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 MARCH4Q9P2E8 410 aaPredicted RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 XPR1Q9UBH6 696 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 TCAF1Q9Y4C2 921 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 TPRP12270 2363 aaKnown RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 A0A1W2PQ67 120 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 SLC9A3R1O14745 358 aaPredicted RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 NIPSNAP2O75323 286 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 AHSGP02765 367 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 ITGALP20701 1170 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 LPOP22079 712 aaPredicted RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 CCR10P46092 362 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 PIK3CGP48736 1102 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 SKOR1P84550 965 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 TRAF2Q12933 501 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 ITIH4Q14624 930 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 SYTL3Q4VX76 610 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 AGAP9Q5VTM2 703 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 RAET1GQ6H3X3 334 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 SDE2Q6IQ49 451 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 UMODL1-AS1Q8N2C9 162 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 TRIML2Q8N7C3 387 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 HERVK_113Q902F9 699 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 SH3KBP1Q96B97 665 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 OXCT2Q9BYC2 517 aaPredicted RBP9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 IL21Q9HBE4 155 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 TMEM216Q9P0N5 145 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 ORC6Q9Y5N6 252 aa9.03□□□□□ -0.96
CCDC144B-201ENST00000285176 E9PBE3 544 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 KLHL41O60662 606 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 ESRRBO95718 433 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 HCAR3P49019 387 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 SERPINB8P50452 374 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 BTKQ06187 659 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 RING1Q06587 406 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 RFLNAQ6ZTI6 216 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 NUDT18Q6ZVK8 323 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 RFWD2Q8NHY2 731 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 WDR83Q9BRX9 315 aaKnown RBP9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 OSBPL1AQ9BXW6 950 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 TBC1D14Q9P2M4 693 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 CDYLQ9Y232 598 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 SPO11Q9Y5K1 396 aa9.02□□□□□ -0.96
CCDC144B-201ENST00000285176 TBC1D3DA0A087WVF3 549 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TBC1D3IA0A087WXS9 549 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TBC1D3EA0A087X179 549 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TBC1D3KA0A087X1G2 549 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TBC1D3FA6NER0 549 aaPredicted RBP9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 EPOPA6NHQ4 379 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 LRRC37A2A6NM11 1700 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TBC1D3LB9A6J9 549 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TM9SF1O15321 606 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 LEFTY1O75610 366 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 SERPIND1P05546 499 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 ELFN1P0C7U0 828 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TBC1D3HP0C7X1 549 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms