RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 ZNF783Q6ZMS7 281 aa10.98□□□□□ -0.65
GGPS1-201ENST00000282841 CELF5Q8N6W0 485 aaKnown RBP10.98□□□□□ -0.65
GGPS1-201ENST00000282841 E2F7Q96AV8 911 aa10.98□□□□□ -0.65
GGPS1-201ENST00000282841 TIFAQ96CG3 184 aa10.98□□□□□ -0.65
GGPS1-201ENST00000282841 CYP4F12Q9HCS2 524 aa10.98□□□□□ -0.65
GGPS1-201ENST00000282841 SARS2Q9NP81 518 aaKnown RBP10.98□□□□□ -0.65
GGPS1-201ENST00000282841 CATSPERZQ9NTU4 200 aa10.98□□□□□ -0.65
GGPS1-201ENST00000282841 BLOC1S6Q9UL45 172 aa10.98□□□□□ -0.65
GGPS1-201ENST00000282841 LAMA1P25391 3075 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 HELZP42694 1942 aaKnown RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 DOCK8Q8NF50 2099 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 C2orf81A6NN90 581 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 TRAFD1O14545 582 aaPredicted RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 CRTAMO95727 393 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 ADH5P11766 374 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 SOX9P48436 509 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 SLC12A2P55011 1212 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 KCNC3Q14003 757 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 MYLK3Q32MK0 819 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 HECTD2Q5U5R9 776 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 CNTN4Q8IWV2 1026 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 PHC3Q8NDX5 983 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 PTCD2Q8WV60 388 aaKnown RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 KLHL32Q96NJ5 620 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 MRM3Q9HC36 420 aaKnown RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 USP15Q9Y4E8 981 aaPredicted RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 GLRA3O75311 464 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 IGSF6O95976 241 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 SBK3P0C264 359 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 CCDC166P0CW27 439 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 ALADP13716 330 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 POLR2EP19388 210 aaKnown RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 LPOP22079 712 aaPredicted RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 DDX6P26196 483 aaKnown RBP eCLIP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 GCKP35557 465 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 WASP42768 502 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 SLC18A1P54219 525 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 CSE1LP55060 971 aaKnown RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 RAB10P61026 200 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 NSUN2Q08J23 767 aaKnown RBP eCLIP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 PEX6Q13608 980 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 FSTL5Q8N475 847 aaPredicted RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 CLDN19Q8N6F1 224 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 BPIFB1Q8TDL5 484 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 HEXDCQ8WVB3 486 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 FGF14Q92915 247 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 PRR11Q96HE9 360 aaPredicted RBP10.97□□□□□ -0.65
GGPS1-201ENST00000282841 RANBP9Q96S59 729 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 MYADMQ96S97 322 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 FAM167BQ9BTA0 163 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 MFSD1Q9H3U5 465 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 SFXN1Q9H9B4 322 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 NMRAL1Q9HBL8 299 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 GPAMQ9HCL2 828 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 DCDC2Q9UHG0 476 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 SLC25A13Q9UJS0 675 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 ZNF711Q9Y462 761 aa10.97□□□□□ -0.65
GGPS1-201ENST00000282841 SLC7A4O43246 635 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 FZD6O60353 706 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 SNUPNO95149 360 aaKnown RBP10.96□□□□□ -0.65
GGPS1-201ENST00000282841 CPA3P15088 417 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 TSPAN8P19075 237 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 KCNC1P48547 511 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 DGKGP49619 791 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 CCDC15Q0P6D6 951 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 NAB1Q13506 487 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 TAF1AQ15573 450 aaPredicted RBP10.96□□□□□ -0.65
GGPS1-201ENST00000282841 ARSIQ5FYB1 569 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 PARM1Q6UWI2 310 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 TTC30BQ8N4P2 665 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 OR2A12Q8NGT7 310 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 STYXQ8WUJ0 223 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 SMARCD2Q92925 531 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 SLC30A3Q99726 388 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 BOCQ9BWV1 1114 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 C1QTNF1Q9BXJ1 281 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 NSRP1Q9H0G5 558 aaKnown RBP10.96□□□□□ -0.65
GGPS1-201ENST00000282841 NLE1Q9NVX2 485 aaPredicted RBP10.96□□□□□ -0.65
GGPS1-201ENST00000282841 TBC1D14Q9P2M4 693 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 XPR1Q9UBH6 696 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 ACOT9Q9Y305 439 aa10.96□□□□□ -0.65
GGPS1-201ENST00000282841 FGF19O95750 216 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 FGF3P11487 239 aaPredicted RBP10.96□□□□□ -0.66
GGPS1-201ENST00000282841 LEPRP48357 1165 aaKnown RBP10.96□□□□□ -0.66
GGPS1-201ENST00000282841 PDCD2Q16342 344 aaPredicted RBP10.96□□□□□ -0.66
GGPS1-201ENST00000282841 ELMSAN1Q6PJG2 1045 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 OSCP1Q8WVF1 389 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 ATP13A3Q9H7F0 1226 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 FBRSL1Q9HCM7 1045 aaKnown RBP10.96□□□□□ -0.66
GGPS1-201ENST00000282841 CLDND1Q9NY35 253 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 LMCD1Q9NZU5 365 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 COPG2Q9UBF2 871 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 ERVW-1Q9UQF0 538 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 ITM2BQ9Y287 266 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 VWA7Q9Y334 891 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 GON4LQ3T8J9 2241 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 VPS13AQ96RL7 3174 aa10.96□□□□□ -0.66
GGPS1-201ENST00000282841 G3V2L1 256 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 NIPSNAP2O75323 286 aa10.95□□□□□ -0.66
GGPS1-201ENST00000282841 LEFTY1O75610 366 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms