RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ANKRD34BA5PLL1 514 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 KPNA6O60684 536 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 SOAT2O75908 522 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 IPO13O94829 963 aaKnown RBP16.28■□□□□ 0.2
GPC1-201ENST00000264039 NPY2RP49146 381 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 ARL13BQ3SXY8 428 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 GPR158Q5T848 1215 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 MAP1SQ66K74 1059 aaPredicted RBP16.28■□□□□ 0.2
GPC1-201ENST00000264039 EFCAB12Q6NXP0 572 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 PLEKHG7Q6ZR37 379 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 CNIH3Q8TBE1 160 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 MCRS1Q96EZ8 462 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 MRPL57Q9BQC6 102 aaKnown RBP16.28■□□□□ 0.2
GPC1-201ENST00000264039 ABCG8Q9H221 673 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 AKTIPQ9H8T0 292 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 ZNF277Q9NRM2 450 aaPredicted RBP16.28■□□□□ 0.2
GPC1-201ENST00000264039 CCM2LQ9NUG4 571 aaPredicted RBP16.28■□□□□ 0.2
GPC1-201ENST00000264039 FAM50BQ9Y247 325 aa16.28■□□□□ 0.2
GPC1-201ENST00000264039 PIP5K1BO14986 540 aa16.27■□□□□ 0.2
GPC1-201ENST00000264039 MBL2P11226 248 aaPredicted RBP16.27■□□□□ 0.2
GPC1-201ENST00000264039 LBPP18428 481 aa16.27■□□□□ 0.2
GPC1-201ENST00000264039 HLCSP50747 726 aa16.27■□□□□ 0.2
GPC1-201ENST00000264039 HERC3Q15034 1050 aa16.27■□□□□ 0.2
GPC1-201ENST00000264039 SPATC1Q76KD6 591 aa16.27■□□□□ 0.2
GPC1-201ENST00000264039 MAGEE1Q9HCI5 957 aa16.27■□□□□ 0.2
GPC1-201ENST00000264039 RIC8BQ9NVN3 520 aa16.27■□□□□ 0.2
GPC1-201ENST00000264039 IPO11Q9UI26 975 aaKnown RBP16.27■□□□□ 0.2
GPC1-201ENST00000264039 SIPA1L3O60292 1781 aaPredicted RBP16.27■□□□□ 0.19
GPC1-201ENST00000264039 ABCB7O75027 752 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 GSRP00390 522 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 CYP2C8P10632 490 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 TMBIM6P55061 237 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 TRAP1Q12931 704 aaKnown RBP16.27■□□□□ 0.19
GPC1-201ENST00000264039 PDPRQ8NCN5 879 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 ATL1Q8WXF7 558 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 C14orf119Q9NWQ9 140 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 TMEM9Q9P0T7 183 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 GON4LQ3T8J9 2241 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 A0A1B0GUL6 1792 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 DIO3P55073 304 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 CNTN2Q02246 1040 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 NIPAL4Q0D2K0 466 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 NAB1Q13506 487 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 INAVAQ3KP66 663 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 SNAP47Q5SQN1 464 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 STRIP1Q5VSL9 837 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 KDM1BQ8NB78 822 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 SLC2A14Q8TDB8 520 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 HDAC2Q92769 488 aaKnown RBP16.27■□□□□ 0.19
GPC1-201ENST00000264039 SLCO4A1Q96BD0 722 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 COMMD8Q9NX08 183 aa16.27■□□□□ 0.19
GPC1-201ENST00000264039 ROBO1Q9Y6N7 1651 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 TOMM70O94826 608 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 RBP1P09455 135 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 IL4RP24394 825 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 BNIP2Q12982 314 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 CENPLQ8N0S6 344 aaPredicted RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 ZBTB18Q99592 522 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 MRPL45Q9BRJ2 306 aaKnown RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 CNOT11Q9UKZ1 510 aaKnown RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 ANKRD6Q9Y2G4 727 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 UGT2A1Q9Y4X1 527 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 ZNF99A8MXY4 864 aaPredicted RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 MLNP12872 115 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 SNX17Q15036 470 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 RBM20Q5T481 1227 aaKnown RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 ITIH5Q86UX2 942 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 EID3Q8N140 333 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 ARNTL2Q8WYA1 636 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 LRRC58Q96CX6 371 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 ZNF486Q96H40 463 aaPredicted RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 CDK5RAP1Q96SZ6 601 aaKnown RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 HGH1Q9BTY7 390 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 SLC2A11Q9BYW1 496 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 IL22Q9GZX6 179 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 PLAC1Q9HBJ0 212 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 SETD4Q9NVD3 440 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 PAQR5Q9NXK6 330 aaPredicted RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 ITM2BQ9Y287 266 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 WBP11Q9Y2W2 641 aaKnown RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 EIF3FO00303 357 aaPredicted RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 CPNE3O75131 537 aaKnown RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 PIRTP0C851 137 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 DDX5P17844 614 aaKnown RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 DCKP27707 260 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 CCT8P50990 548 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 SMUG1Q53HV7 270 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 STXBP5Q5T5C0 1151 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 NCBP2-AS2Q69YL0 99 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 GCNT7Q6ZNI0 430 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 HORMAD1Q86X24 394 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 TSEN34Q9BSV6 310 aaKnown RBP16.26■□□□□ 0.19
GPC1-201ENST00000264039 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 SLC2A6Q9UGQ3 507 aa16.26■□□□□ 0.19
GPC1-201ENST00000264039 SLIT2O94813 1529 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 VTNP04004 478 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 ITIH1P19827 911 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 CHRNA4P43681 627 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 IDH2P48735 452 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms