RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 DISP2A7MBM2 1401 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 STX11O75558 287 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 CXCR3P49682 368 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 NR1D2Q14995 579 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 GPR107Q5VW38 600 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 TMPRSS11BQ86T26 416 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 FNIP1Q8TF40 1166 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 CAPSLQ8WWF8 208 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 PTCD3Q96EY7 689 aaKnown RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 TTLL2Q9BWV7 592 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 KIAA1522Q9P206 1035 aaPredicted RBP12.1□□□□□ -0.47
COL8A1-201ENST00000261037 TBC1D30Q9Y2I9 924 aa12.1□□□□□ -0.47
COL8A1-201ENST00000261037 MSCO60682 206 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 TOP3BO95985 862 aaKnown RBP12.09□□□□□ -0.47
COL8A1-201ENST00000261037 GLUD1P00367 558 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 SERPINA6P08185 405 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 CORO1AP31146 461 aaKnown RBP12.09□□□□□ -0.47
COL8A1-201ENST00000261037 MANFP55145 182 aaKnown RBP12.09□□□□□ -0.47
COL8A1-201ENST00000261037 TAF10Q12962 218 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 PEG10Q86TG7 708 aaKnown RBP12.09□□□□□ -0.47
COL8A1-201ENST00000261037 RBFAQ8N0V3 343 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 ZNF563Q8TA94 476 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 MFSD14AQ96MC6 490 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 HMG20AQ9NP66 347 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 EVLQ9UI08 416 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-201ENST00000261037 FBXO5Q9UKT4 447 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 EFR3BQ9Y2G0 817 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 PTCH2Q9Y6C5 1203 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 BTNL10A8MVZ5 291 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 FOXO6A8MYZ6 492 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 TGFB1I1O43294 461 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 MED22Q15528 200 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 ARSHQ5FYA8 562 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 RGMBQ6NW40 437 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 C12orf50Q8NA57 414 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-201ENST00000261037 RACGAP1Q9H0H5 632 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 LRMDAQ9H2I8 198 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 SNX10Q9Y5X0 201 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 CACNB4O00305 520 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-201ENST00000261037 FSBPO95073 299 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 OR5F1O95221 314 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 ADH1CP00326 375 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 DRD4P21917 467 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 RCVRNP35243 200 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 PSMD4P55036 377 aaKnown RBP12.09□□□□□ -0.47
COL8A1-201ENST00000261037 SLC25A52Q3SY17 297 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 HECTD2Q5U5R9 776 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 FAM46CQ5VWP2 391 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 MZT2BQ6NZ67 158 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 PTCHD4Q6ZW05 846 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 COPS8Q99627 209 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 TTPALQ9BTX7 342 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 DPEP3Q9H4B8 488 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 WDR55Q9H6Y2 383 aaPredicted RBP12.09□□□□□ -0.47
COL8A1-201ENST00000261037 FAM25EA8MYX2 175 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 ITPKBP27987 946 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 FOLH1Q04609 750 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 DEFB115Q30KQ5 88 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 KRT74Q7RTS7 529 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 IRF2BP2Q7Z5L9 587 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 ULK2Q8IYT8 1036 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 PPTC7Q8NI37 304 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 RDH11Q8TC12 318 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 RELTQ969Z4 430 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 Q96MT0 163 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 GGA2Q9UJY4 613 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 VWA7Q9Y334 891 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 SIGLEC1Q9BZZ2 1709 aa12.09□□□□□ -0.47
COL8A1-201ENST00000261037 G3V2T6 193 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 CCL22O00626 93 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 GRM6O15303 877 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 SLC22A3O75751 556 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 STBD1O95210 358 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 SEC24AO95486 1093 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 FADS2O95864 444 aaKnown RBP12.08□□□□□ -0.47
COL8A1-201ENST00000261037 BMP7P18075 431 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 TCEA1P23193 301 aaKnown RBP12.08□□□□□ -0.47
COL8A1-201ENST00000261037 TAB1Q15750 504 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 ZACNQ401N2 412 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 BHLHB9Q6PI77 547 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 ARCQ7LC44 396 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 RALGPS2Q86X27 583 aaPredicted RBP12.08□□□□□ -0.47
COL8A1-201ENST00000261037 BSNDQ8WZ55 320 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 C12orf65Q9H3J6 166 aaKnown RBP12.08□□□□□ -0.47
COL8A1-201ENST00000261037 CLIC5Q9NZA1 410 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 ERGIC3Q9Y282 383 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 ACTL7BQ9Y614 415 aa12.08□□□□□ -0.47
COL8A1-201ENST00000261037 GLYATL1P3A0A0U1RQE8 302 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 BIRC5O15392 142 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 FGF1P05230 155 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 OMPP47874 163 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ARF5P84085 180 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 TIGD2Q4W5G0 525 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 CEP68Q76N32 757 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 PIH1D2Q8WWB5 315 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 TP53INP1Q96A56 240 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 ANKRD27Q96NW4 1050 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 BRINP2Q9C0B6 783 aa12.08□□□□□ -0.48
COL8A1-201ENST00000261037 TRMT13Q9NUP7 481 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms