RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 RXRGP48443 463 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ATXN1P54253 815 aaKnown RBP18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 VWA5B1Q5TIE3 1220 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 CUZD1Q86UP6 607 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 OR7D4Q8NG98 312 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 APOLD1Q96LR9 279 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 CYP2S1Q96SQ9 504 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 FNDC11Q9BVV2 318 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 MAP2K7O14733 419 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 GABRB2P47870 512 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 MYBPC1Q00872 1141 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 RFX4Q33E94 735 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 PERM1Q5SV97 790 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 CLEC6AQ6EIG7 209 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 C1orf127Q8N9H9 656 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ZFP28Q8NHY6 868 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 CDH19Q9H159 772 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 KLF15Q9UIH9 416 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ACTL7BQ9Y614 415 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ZNF780BQ9Y6R6 833 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ASNA1O43681 348 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 FGF1P05230 155 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 UQCRBP14927 111 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 PEX6Q13608 980 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 RNASEH2BQ5TBB1 312 aaKnown RBP18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 FAM129CQ86XR2 697 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ZNF557Q8N988 423 aaPredicted RBP18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ZNF398Q8TD17 642 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ENOPH1Q9UHY7 261 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 SESN1Q9Y6P5 492 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ARHGAP23Q9P227 1491 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 A0A087WXM4 84 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 TSPAN1O60635 241 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 ADH1CP00326 375 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 HECTD2Q5U5R9 776 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 C19orf60Q96EN9 201 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 RNPEPL1Q9HAU8 725 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 RPS6KA6Q9UK32 745 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 SATB2Q9UPW6 733 aa18.68■□□□□ 0.58
SMARCC1-201ENST00000254480 CACNB4O00305 520 aaPredicted RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 MT-ND1P03886 318 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 C4BPAP04003 597 aaKnown RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 ANPEPP15144 967 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 EFNA1P20827 205 aaPredicted RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 PBX3P40426 434 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 ZNF460Q14592 562 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 PPCDCQ96CD2 204 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 TRAF6Q9Y4K3 522 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 ALAS2P22557 587 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 GSTCDQ8NEC7 633 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 OR14C36Q8NHC7 312 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 RHOBTB2Q9BYZ6 727 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 ABCG4Q9H172 646 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 CLN6Q9NWW5 311 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 DCCP43146 1447 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 KIAA1210Q9ULL0 1709 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 GLYATL1P3A0A0U1RQE8 302 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 FAM237AA0A1B0GTK4 181 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 TRIM38O00635 465 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 DRD4P21917 467 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 LMO2P25791 158 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 MAT2AP31153 395 aaKnown RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 SSR2P43308 183 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 TNK2Q07912 1038 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 FAM46CQ5VWP2 391 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 PRSS55Q6UWB4 352 aaPredicted RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 CHST9Q7L1S5 443 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 ATP6V1C2Q8NEY4 427 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 AZIN2Q96A70 460 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 CLPTM1LQ96KA5 538 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 KIFC1Q9BW19 673 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 NDRG2Q9UN36 371 aaKnown RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 A0A1W2PQ67 120 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 IDH3BO43837 385 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 HOXC6P09630 235 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 RNASE12Q5GAN4 147 aaKnown RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 PIWIL4Q7Z3Z4 852 aaKnown RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 NET1Q7Z628 596 aaPredicted RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 ST13P5Q8NFI4 369 aaPredicted RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 PPM1MQ96MI6 270 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 INPP4AQ96PE3 977 aaPredicted RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 QKIQ96PU8 341 aaKnown RBP eCLIP18.67■□□□□ 0.583e-7■■■□□ 15.5
SMARCC1-201ENST00000254480 TRMT13Q9NUP7 481 aaKnown RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 CLEC4AQ9UMR7 237 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 CILPO75339 1184 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 MT-CYBP00156 380 aaPredicted RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 SLC47A1Q96FL8 570 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 ZFRQ96KR1 1074 aaKnown RBP18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 PTPN18Q99952 460 aa18.67■□□□□ 0.58
SMARCC1-201ENST00000254480 RASGRP1O95267 797 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 CEP68Q76N32 757 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 KLK6Q92876 244 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 CD101Q93033 1021 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 OR6C75A6NL08 312 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 DDX3YO15523 660 aaKnown RBP18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 TIPRLO75663 272 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 C2P06681 752 aa18.66■□□□□ 0.58
SMARCC1-201ENST00000254480 FUT2Q10981 343 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms