RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 HS3ST3A1Q9Y663 406 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 R4GN57 208 aa14.09□□□□□ -0.15
VPS25-201ENST00000253794 TNRC6BQ9UPQ9 1833 aaKnown RBP14.08□□□□□ -0.15
VPS25-201ENST00000253794 USP34Q70CQ2 3546 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 A0A0U1RQS6 177 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 MAGEB16A2A368 324 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 PRR23AA6NEV1 266 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 A8MX80 341 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 PRAMEF26H0Y7S4 382 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 H7C0S8 307 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 TOR1BO14657 336 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 LZTS3O60299 673 aaPredicted RBP14.08□□□□□ -0.16
VPS25-201ENST00000253794 FSBPO95073 299 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 TPH1P17752 444 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 HNRNPA2B1P22626 353 aaKnown RBP14.08□□□□□ -0.16
VPS25-201ENST00000253794 ETV3P41162 512 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 PTGER3P43115 390 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 GUCY2DQ02846 1103 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 POU6F1Q14863 301 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 ACOX1Q15067 660 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 WSCD2Q2TBF2 565 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 HENMT1Q5T8I9 393 aaKnown RBP14.08□□□□□ -0.16
VPS25-201ENST00000253794 LYSMD4Q5XG99 296 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 PDPK2PQ6A1A2 396 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 Q6ZVL8 140 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 EIF1ADQ8N9N8 165 aaKnown RBP14.08□□□□□ -0.16
VPS25-201ENST00000253794 STYXQ8WUJ0 223 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 RUBCNQ92622 972 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 LRRC39Q96DD0 335 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 NUS1Q96E22 293 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 ABCG8Q9H221 673 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 NLE1Q9NVX2 485 aaPredicted RBP14.08□□□□□ -0.16
VPS25-201ENST00000253794 PIH1D1Q9NWS0 290 aaKnown RBP14.08□□□□□ -0.16
VPS25-201ENST00000253794 SOX13Q9UN79 622 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 COQ6Q9Y2Z9 468 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 ARL5AQ9Y689 179 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 SCN8AQ9UQD0 1980 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 TRPM6Q9BX84 2022 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 ABCA7Q8IZY2 2146 aa14.08□□□□□ -0.16
VPS25-201ENST00000253794 LRRK1Q38SD2 2015 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 SDR42E2A6NKP2 422 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 MEI4A8MW99 385 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 GOLGA8MH3BSY2 632 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 RAD51BO15315 384 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 EIF3HO15372 352 aaKnown RBP eCLIP14.07□□□□□ -0.16
VPS25-201ENST00000253794 AVILO75366 819 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 EPN2O95208 641 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 PAK4O96013 591 aaPredicted RBP14.07□□□□□ -0.16
VPS25-201ENST00000253794 PYGLP06737 847 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 BPIP17213 487 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 MGAT1P26572 445 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 MAT2AP31153 395 aaKnown RBP14.07□□□□□ -0.16
VPS25-201ENST00000253794 AKT2P31751 481 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 TRIM23P36406 574 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 HADHAP40939 763 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 TERF1P54274 439 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 SESN2P58004 480 aaPredicted RBP14.07□□□□□ -0.16
VPS25-201ENST00000253794 RACK1P63244 317 aaKnown RBP14.07□□□□□ -0.16
VPS25-201ENST00000253794 CUL1Q13616 776 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 LRRC14Q15048 493 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 TRADDQ15628 312 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 HIF1AQ16665 826 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 DNAJC21Q5F1R6 531 aaKnown RBP14.07□□□□□ -0.16
VPS25-201ENST00000253794 FNBP1LQ5T0N5 605 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 ABI3BPQ7Z7G0 1075 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 IQCHQ86VS3 1027 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 PDIK1LQ8N165 341 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 AGGF1Q8N302 714 aaeCLIP14.07□□□□□ -0.16
VPS25-201ENST00000253794 SUMF1Q8NBK3 374 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 GPR26Q8NDV2 337 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 PPHLN1Q8NEY8 458 aaKnown RBP14.07□□□□□ -0.16
VPS25-201ENST00000253794 FBXO25Q8TCJ0 367 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 SGSM3Q96HU1 749 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 EPB41L5Q9HCM4 733 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 GPR27Q9NS67 375 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 TREX1Q9NSU2 369 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 SYBUQ9NX95 663 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 PILRBQ9UKJ0 227 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 PKP3Q9Y446 797 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 PCDHGA5Q9Y5G8 931 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 SPAG17Q6Q759 2223 aa14.07□□□□□ -0.16
VPS25-201ENST00000253794 PLXNA2O75051 1894 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 ZNF106Q9H2Y7 1883 aaKnown RBP14.06□□□□□ -0.16
VPS25-201ENST00000253794 BPTFQ12830 3046 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 FAM237BA0A1B0GVD1 139 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 ESYT3A0FGR9 886 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 PROB1E7EW31 1015 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 GAPDHSO14556 408 aaPredicted RBP14.06□□□□□ -0.16
VPS25-201ENST00000253794 STX7O15400 261 aaKnown RBP14.06□□□□□ -0.16
VPS25-201ENST00000253794 SLC31A1O15431 190 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 SOD1P00441 154 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 HOXC4P09017 264 aaPredicted RBP14.06□□□□□ -0.16
VPS25-201ENST00000253794 TSHRP16473 764 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 ECHS1P30084 290 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 IGFALSP35858 605 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 SPAM1P38567 509 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 DHPSP49366 369 aaPredicted RBP14.06□□□□□ -0.16
VPS25-201ENST00000253794 ARL4CP56559 192 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 XIAPP98170 497 aa14.06□□□□□ -0.16
VPS25-201ENST00000253794 OVGP1Q12889 678 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms