RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SPRED1Q7Z699 444 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 JAMLQ86YT9 394 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 ZNF843Q8N446 348 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 TEX26Q8N6G2 289 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 CPLX3Q8WVH0 158 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 MCCC1Q96RQ3 725 aaPredicted RBP21.04■□□□□ 0.96
NEDD8-201ENST00000250495 NT5MQ9NPB1 228 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 ATXN7L1Q9ULK2 861 aaPredicted RBP21.04■□□□□ 0.96
NEDD8-201ENST00000250495 CAPN11Q9UMQ6 739 aa21.04■□□□□ 0.96
NEDD8-201ENST00000250495 A0A087X0T9 212 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 GOLGA6CA6NDK9 693 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 GOLGA6BA6NDN3 693 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 NPIPB15A6NHN6 443 aaPredicted RBP21.03■□□□□ 0.96
NEDD8-201ENST00000250495 FAM228BP0C875 321 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 GOLGA6DP0CG33 693 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 LHCGRP22888 699 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 CES1P23141 567 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 CDK3Q00526 305 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 DPTQ07507 201 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 ITKQ08881 620 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 ZSCAN23Q3MJ62 389 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 RAET1GQ6H3X3 334 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 ALKBH5Q6P6C2 394 aaKnown RBP21.03■□□□□ 0.96
NEDD8-201ENST00000250495 Q6ZVL8 140 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 ZNF605Q86T29 641 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 SFTPA2Q8IWL1 248 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 FAM71BQ8TC56 605 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 PIH1D2Q8WWB5 315 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 CCNL2Q96S94 520 aaPredicted RBP21.03■□□□□ 0.96
NEDD8-201ENST00000250495 CMKLR1Q99788 373 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 SEMA3CQ99985 751 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 FRMD8Q9BZ67 464 aaPredicted RBP21.03■□□□□ 0.96
NEDD8-201ENST00000250495 POLR1EQ9GZS1 481 aaKnown RBP21.03■□□□□ 0.96
NEDD8-201ENST00000250495 CBX8Q9HC52 389 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 SPATS2LQ9NUQ6 558 aaKnown RBP21.03■□□□□ 0.96
NEDD8-201ENST00000250495 HAUS2Q9NVX0 235 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 GOLGA6AQ9NYA3 693 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 LUC7L2Q9Y383 392 aaKnown RBP21.03■□□□□ 0.96
NEDD8-201ENST00000250495 LOXL2Q9Y4K0 774 aa21.03■□□□□ 0.96
NEDD8-201ENST00000250495 MGAQ8IWI9 3026 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 NVLO15381 856 aaKnown RBP21.02■□□□□ 0.96
NEDD8-201ENST00000250495 FGF1P05230 155 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 HGFP14210 728 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 GNPDA1P46926 289 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 TIGD7Q6NT04 549 aaPredicted RBP21.02■□□□□ 0.96
NEDD8-201ENST00000250495 TECPR1Q7Z6L1 1165 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 LUZP1Q86V48 1076 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 C17orf82Q86X59 251 aaPredicted RBP21.02■□□□□ 0.96
NEDD8-201ENST00000250495 ZDHHC1Q8WTX9 485 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 SUDS3Q9H7L9 328 aaPredicted RBP21.02■□□□□ 0.96
NEDD8-201ENST00000250495 PISDQ9UG56 409 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 ACSL6Q9UKU0 697 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 SUFUQ9UMX1 484 aa21.02■□□□□ 0.96
NEDD8-201ENST00000250495 RHPN2P1A8MT19 583 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 GOLGA6L19H0YKK7 550 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 FZD6O60353 706 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 FUCA1P04066 466 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 CTPS1P17812 591 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 GARSP41250 739 aaKnown RBP21.01■□□□□ 0.95
NEDD8-201ENST00000250495 GPR1P46091 355 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 B4GALNT1Q00973 533 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 MMRN1Q13201 1228 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 BIRC2Q13490 618 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 CLPPQ16740 277 aaPredicted RBP21.01■□□□□ 0.95
NEDD8-201ENST00000250495 TSPAN33Q86UF1 283 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 PIM3Q86V86 326 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 NLRP8Q86W28 1048 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 NRROSQ86YC3 692 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 WDR70Q9NW82 654 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 TAAR2Q9P1P5 351 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 AMACRQ9UHK6 382 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 SLC17A4Q9Y2C5 497 aa21.01■□□□□ 0.95
NEDD8-201ENST00000250495 SYCE3A1L190 88 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 MATN3O15232 486 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 B4GAT1O43505 415 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 CPNE6O95741 557 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 PYGLP06737 847 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 IVLP07476 585 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 PDHA1P08559 390 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 CD48P09326 243 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 GALNT2Q10471 571 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 DPYSL3Q14195 570 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 PAFAH1B3Q15102 231 aaKnown RBP21■□□□□ 0.95
NEDD8-201ENST00000250495 IFI16Q16666 785 aaKnown RBP21■□□□□ 0.95
NEDD8-201ENST00000250495 MAP7D3Q8IWC1 876 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 KCTD6Q8NC69 237 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 ZNF564Q8TBZ8 553 aaPredicted RBP21■□□□□ 0.95
NEDD8-201ENST00000250495 TTC9Q92623 222 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 AP2M1Q96CW1 435 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 ABCG8Q9H221 673 aa21■□□□□ 0.95
NEDD8-201ENST00000250495 AKAP7Q9P0M2 348 aaPredicted RBP21■□□□□ 0.95
NEDD8-201ENST00000250495 AHCTF1Q8WYP5 2266 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 A0A0J9YYE9 177 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 ECEL1O95672 775 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 TRBC1P01850 177 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 ZNF30P17039 623 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 CCNCP24863 283 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 AK4P27144 223 aaPredicted RBP20.99■□□□□ 0.95
NEDD8-201ENST00000250495 ALDH4A1P30038 563 aa20.99■□□□□ 0.95
NEDD8-201ENST00000250495 ADCY8P40145 1251 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms